1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgagatcaccttctcctcttattacattatattgttctctattattcatggtcatatcatcactagtaatagaccgcggacagcttgcatatattatttccttgggttaaagcttagtggaccaggtgactagagcaggcatgtagtttgatgtgtgcacctcattgtttttttttcagACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAACTTCAGAAACAAATTTTCTGATGATTGGGAACGGTTTCTGTCAAAGCATC
species | Zea mays |
transcript | GRMZM2G034536_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGATGTTCGTTGCAAGAGATGTTATCATTATATTCCTTCTTATACAAGCC ACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAACEST: gi|101385086|gb|EB814588.1|EB814588
genomic: GGATGTTCGTTGCAAGAGATGTTATCATTATATTCCTTCTTATACAAGCCgtgagatcac ... tttttttcagACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAAC
EST: GGATGTTCGTTGCAAGAGATGTTATCATTATATTCCTTCCTATACAAGCC ACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAACEST: gi|88756868|gb|DY541009.1|DY541009
genomic: GGATGTTCGTTGCAAGAGATGTTATCATTATATTCCTTCTTATACAAGCCgtgagatcac ... tttttttcagACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAAC
EST: GGATGTTCGTTGCAAGAGATGTTATCATTATATTCCTTCTTATACAAGCC ACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAAC
genomic: GGATGTTCGTTGCAAGAGATGTTATCATTATATTCCTTCTTATACAAGCCgtgagatcac ... tttttttcagACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAAC
ggtgactagagcaggcatgtagtttgatgtgtgcacctcattgtttttttttcagACCATCGCAGCTATAGGTGGTATGGCATATTTTTTGGACAAAGACGGAAACTTCAGAAACAAATTTTCTGATGATTGGGAACGGTTTCTGTCAAAGCATC
gtttgat putative branch site (score: 31)
cctcattgtttttttt putative PPT
tcattgttttttttt TA-rich tract