1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tttagttgtcttgtttctaggataaattcttgttgaagtgctagtaccttgttttcttgtatgttgctctaatttatcttataaaaatattattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCCATGTCCTTGATTTCATACCGTGATTTGGTTGGGGTGGCCTATACTGAG
species | Zea mays |
transcript | GRMZM2G032367_T04 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|148953376|gb|EE152870.2|EE152870
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|6127287|gb|AW129812.1|AW129812
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCATGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|30705068|gb|CD058657.1|CD058657
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|101393982|gb|EB818924.1|EB818924
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|88757330|gb|DY541471.1|DY541471
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|91878167|gb|EB408124.1|EB408124
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|32907328|gb|CF012141.1|CF012141
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCATGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|91048031|gb|EB158449.1|EB158449
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|76020657|gb|DT947827.1|DT947827
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|71327453|gb|DR800341.1|DR800341
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|71448913|gb|DR829963.1|DR829963
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|50338207|gb|CO533333.1|CO533333
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|149084255|gb|EE173682.2|EE173682
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCEST: gi|149110785|gb|EE190606.2|EE190606
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
EST: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATC AATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
genomic: GATTATCCGTGGCCACATGCTGGCATCATGAGCTCTTATGATCATGCATCgtaagtcaac ... tattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTC
accttgttttcttgtatgttgctctaatttatcttataaaaatattattgcacagAATTCGCCGAGGGCATCAAGTTTACACACAAGTTTGTGCTTCTTGTCACTCCATGTCCTTGATTTCATACCGTGATTTGGTTGGGGTGGCCTATACTGAG
ctctaat putative branch site (score: 259)
tatgttgctctaattt TA-rich tract