Sequence
atgc intronic sequence ATGC exonic sequencegtatgtcatgaaatggtcggcttttgtgctatgcatgctgttcccactttcactatgcacttcccaccttttggacatctctcatgtctcccaccacccgaatactatatttcagGCGCAATAGCGATATTCAGCAGAATGAACATTGGGACGCTAGATGTCGGGGATTTTCTCG
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G027851_T03 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os07g47100.2 (Oryza sativa), 3'ss of exon 3
gtatgtcat----gaaatggtcggcttttgtgctatgcat----gctgttcccactttcactatgcacttcccaccttttggacatctctcatgtctcccaccacccgaatactatatttcagGCGCAATAGCGATATTCAGCAGAATGAACATTGGGACGCTAGATGTCGGGGATTTTCTCG
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gtacgttctttcagaaatgattcttaattcttccgtgagttggtagtgctttcattttctgttgttccgtgtaaccttttggacttctgagat-tctgactctgatcaatttcttaatttcagCTGCCATTGCAATATTCAGCAGAATGAACATTGGAACGCTGGATGTAGGAGATTTTCTTGMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|76013010|gb|DT940180.1|DT940180EST: ACTATTCGGTGCTGTTGGCACAATGATATCCTTCTTCACAATCTCTCTCG GCGCAATAGCGATATTCAGCAGAATGAACATTGGGACGCTAGATGTCGGGG
genomic: ACTATTCGGTGCTGTTGGCACAATGATATCCTTCTTCACAATCTCTCTCGgtatgtcatg ... tatatttcagGCGCAATAGCGATATTCAGCAGAATGAACATTGGGACGCTAGATGTCGGGG
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ttcccaccttttggacatctctcatgtctcccaccacccgaatactatatttcagGCGCAATAGCGATATTCAGCAGAATGAACATTGGGACGCTAGATGTCGGGGATTTTCTCG
aatactatatttca TA-rich tract