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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgatttagaacagtaccatctcccttatatattttctaaccccatcttataatttttatactgctttgatagtagctattgtagacttgaattccgatgcagatgtagcattgttgtcttctccctgaggtcgagtttttttaatagacttggtgttcatgaactacattgaatcccattgattttgcttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA

Basic information

species Zea mays
transcript GRMZM2G023289_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G023289_T03 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os03g50480.2 (Oryza sativa), 3'ss of exon 3
gtgatttagaacagtaccatctcccttatatattttctaaccccatcttataatttttatactgctttgatagtagctattgtagacttgaattccgatgcagatgtagca-ttgttgtcttctccctgaggtcgagtttttttaatagacttggtgttcatgaactaca-ttgaa----tcccattgattttgcttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA
                                                                                                       || ||  | | |||||  |||  || || |  || ||  |    | | ||||   |  |||| |    ||| |    |  |||| |||||||||| || ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||
-------------------------------------------------------------------------------------------------------atttattagtggttgtaatctatctcagttgtagattgctcttgaaagttggaactt-tgaattgtggttggagatttgacatttattttgcttggtatagATCATTACAAAAATGGCTGCCGCTAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGCCTCATGTCTACTCCAGCTGTATCTGCTGTTATCCGTGAAA

upper sequence: GRMZM2G023289_T03 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA05G34790.1 (Glycine max), 3'ss of exon 3
gtgatttagaacagtaccatctcccttatatattttctaaccccatcttataatttttatactgctttgatagtagctattgtagacttgaattccgatgcagatgtagcattgttgtcttctccctgaggtcgagtttttttaatagacttggtgttcatgaactacattgaatcccattgattttgcttg--ttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA
                                                                                            |||   |        || ||  |  | |  | |   |   |  | || | |  ||   |   | | |||     ||||      | | |||||||  |     | ||||| ||||| |||||| | || || ||||||||||||||||||||| |||| |||||  |  |  | || |||||||| ||||||||||| || |||||||
--------------------------------------------------------------------------------------------ttcttgtatgag---aggatattcatttcatgctacatcacatgcttgtcttctaatgtcaatat-catatttgacatca----ctaatgattttaatgaatctgcagATTATAACTAAAATGTCAGCAGCAAATGGAGTAAGACGTGTTTGGATTGGTCAAAATGGATTGCTTTCAACTCCTGCAGTATCTGCTGTTATACGTGAAA

upper sequence: GRMZM2G023289_T03 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA08G04890.1 (Glycine max), 3'ss of exon 3
gtgatttagaacagtaccatctcccttatatattttctaaccccatcttataatttttatactgctttgatagtagctattgtagacttgaattccgatgcagatgtagcattgttgtcttctccctgaggtcgagtttttttaatagacttggtgttcatgaactacattgaatcccattgattttgcttg--ttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA
                                                                                            |||  ||        || ||  |  | |  | |   |   |  | || | |  ||   | | | | |||     ||||      | | |||||||  |     | ||||| ||||| |||||| | || || ||||||||||||||||||||| |||| |||||  |  |  | || |||||||| ||||||||||| || |||||||
--------------------------------------------------------------------------------------------ttcttatatgag---aggatattcatttcatgctacatcacatgcttgtcttctaatgtcgatat-catatttcacatca----ctaatgattttaatgaatctgcagATTATAACTAAAATGTCAGCAGCAAATGGAGTAAGACGTGTTTGGATTGGTCAAAATGGATTACTTTCCACTCCTGCAGTATCTGCTGTTATACGTGAAA

upper sequence: GRMZM2G023289_T03 (Zea mays), 3'ss of exon 3
lower sequence: AT1G23190.1 (Arabidopsis thaliana), 3'ss of exon 3
gtgatttagaacagtaccatctcccttatatattttctaaccccatcttataatttttatactgctttgatagtagctattgtagacttgaattccgatgcagatgtagcattgttgtcttctccctgaggtcgagttttt-ttaatagacttggtgttcatgaactacattgaatcccattg-attttgcttgtta-cagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA
                                                                                                     |  | | |  |  |   || ||     |  ||  |||  |  |  || |  ||  | |  |  ||| | ||  || | |||  ||||||  | ||| ||||||||||  || ||||| || || ||||| ||| ||||||| ||||||||  |||||| |||  | || |||||||||||||| ||||| || |||||||
----------------------------------------------------------------------------------------------------taagt-ttgtttgatctactcctattacaaatccggttcatactgttacagatgaagatgttttactgcttttcatacaattttattttgtatcttaacagATCATAATTAAGATGGCAGCAGCTAATGGTGTACGACGTGTGTGGGTTGGTAAAAACACTCTGTTATCAACTCCTGCTGTATCAGCTGTGATTCGTGAAA

upper sequence: GRMZM2G023289_T03 (Zea mays), 3'ss of exon 3
lower sequence: Vv01s0011g05370.t01 (Vitis vinifera), 3'ss of exon 4
gtgatttagaacagtaccatctcccttatatattttctaaccccatcttataatttttatactgctttgatagtagctattgtagacttgaattccgatgcagatgtagcattgttgtcttctccctgaggtcgagtttttttaatagacttggtgttcatgaactacattgaatcccattgattttgcttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA
                                                                                   |  |||| ||    || |  ||| |   ||| || ||      | | | |   ||| | ||||    ||  | || || || |   |  | |   ||  |   |||      ||||| ||||  || ||||| ||||| |||||||| |||  ||| |||||||| |||||  |  |  | || |||||||||||||| ||||||||||||||||
---------------------------------------------------------------------------------aaatccttgcatc---atccgaatg-attcttgatggctgtgttgtaatgcc---tttatctaatg---ttttttttaattaatttt-tctatttttataaaaactgc------cagATTATAATTAAGATGGCAGCTGCAAATGGAGTGAGATCTGTCTGGGTTGGTCAAAATGGGTTGCTTTCAACTCCTGCTGTATCAGCTGTCATCCGTGAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211519862|gb|FL340800.1|FL340800
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211510167|gb|FL335461.1|FL335461
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|31353596|gb|CD437953.1|CD437953
EST:     CCATTGTTGTCTCTGGTGATGGCCGTTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211114423|gb|FL039504.1|FL039504
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211538908|gb|FL379332.1|FL379332
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211245824|gb|FL313144.1|FL313144
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211468308|gb|FL243204.1|FL243204
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCANAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211409150|gb|FL322197.1|FL322197
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211520754|gb|FL372662.1|FL372662
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211348782|gb|FL410664.1|FL410664
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211514328|gb|FL308791.1|FL308791
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211320241|gb|FL338456.1|FL338456
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211430936|gb|FL367558.1|FL367558
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211143693|gb|FL324984.1|FL324984
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211113641|gb|FL039501.1|FL039501
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTG
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTG
EST: gi|211092187|gb|FL375383.1|FL375383
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|149106401|gb|EE292127.2|EE292127
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211515016|gb|FL344872.1|FL344872
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211420086|gb|FL350025.1|FL350025
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211445897|gb|FL403744.1|FL403744
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211137320|gb|FL356389.1|FL356389
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211177446|gb|FL359119.1|FL359119
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211217606|gb|FL408377.1|FL408377
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211012104|gb|FL418130.1|FL418130
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211048105|gb|FL385535.1|FL385535
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTTGGGTTGG
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTT-GGGTTGG
EST: gi|148931122|gb|EC873792.2|EC873792
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211114429|gb|FL039510.1|FL039510
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211079915|gb|FL412204.1|FL412204
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211220603|gb|FL338340.1|FL338340
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|67021929|gb|CO450678.1|CO450678
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211111130|gb|FL394545.1|FL394545
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211114427|gb|FL039508.1|FL039508
EST:     CCAGTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211317021|gb|FL376013.1|FL376013
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211009326|gb|FL418558.1|FL418558
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211260711|gb|FL355112.1|FL355112
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211058754|gb|FL342287.1|FL342287
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211030301|gb|FL309717.1|FL309717
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211030302|gb|FL309718.1|FL309718
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211394811|gb|FL369335.1|FL369335
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211443060|gb|FL370676.1|FL370676
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|31356531|gb|CD440888.1|CD440888
EST:     CCATTGTTGTCTCTGGTGATGGCCGTTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211099119|gb|FL353128.1|FL353128
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211491900|gb|FL325739.1|FL325739
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|31354050|gb|CD438407.1|CD438407
EST:     CCATTGTTGTCTCTGGTGATGGCCGTTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|213173746|gb|FM188063.1|FM188063
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211445226|gb|FL373040.1|FL373040
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211114426|gb|FL039507.1|FL039507
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211419246|gb|FL320476.1|FL320476
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211383896|gb|FL356595.1|FL356595
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211477070|gb|FL423432.1|FL423432
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|31351485|gb|CD435842.1|CD435842
EST:     CCATTGTTGTCTCTGGTGATGGCCGTTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211121113|gb|FL321102.1|FL321102
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211134618|gb|FL369500.1|FL369500
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAACACCCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|149060809|gb|EE157261.2|EE157261
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211200656|gb|FL341863.1|FL341863
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|149083128|gb|EE172391.2|EE172391
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211477530|gb|FL326610.1|FL326610
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
EST: gi|211462418|gb|FL327911.1|FL327911
EST:     CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAG                         ATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA
genomic: CCATTGTTGTCTCTGGTGATGGCCGCTATTTCTCAAAAGATGCTGTTCAGgtgatttaga ... cttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatagacttggtgttcatgaactacattgaatcccattgattttgcttgttacagATCATAACAAAAATGGCTGCTGCCAATGGAGTAAGACGTGTTTGGGTTGGACAAAACAGTCTCATGTCTACTCCTGCTGTATCTGCTGTCATCCGTGAAA
                                        ttttgctt  CT-rich tract
                                   attgatttt  TA-rich tract