1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtctggttttctcgacaaagattgcacctttagtcgattgtttgtcttctcatttcttctgttccttccatttcatttgattggactcatcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGCACATCTGCTTAG
species | Zea mays |
transcript | GRMZM2G007381_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAACCCACCCACACATTTACAGCAACGGGEST: gi|71431746|gb|DR812796.1|DR812796
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|211172115|gb|FK994020.1|FK994020
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|45846873|gb|CN070816.1|CN070816
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: AGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCCACGGGEST: gi|50331624|gb|CO526750.1|CO526750
genomic: AGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|211172114|gb|FK994019.1|FK994019
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|116827090|gb|EC870952.1|EC870952
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|17931977|gb|BM268937.1|BM268937
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: GGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|78081936|gb|DV510348.1|DV510348
genomic: GGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|71431745|gb|DR812795.1|DR812795
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|16925448|gb|BM078516.1|BM078516
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|18165814|gb|BM335659.1|BM335659
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAGCGGGEST: gi|211215511|gb|FL424481.1|FL424481
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAACGCATCCACACATTTACAGCAACGGGEST: gi|29946817|gb|CB816340.1|CB816340
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|22819231|gb|BU499321.1|BU499321
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|16919478|gb|BM074211.1|BM074211
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|211172116|gb|FK994021.1|FK994021
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|29945777|gb|CB815814.1|CB815814
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|211172113|gb|FK994018.1|FK994018
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGEST: gi|211172112|gb|FK994017.1|FK994017
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
EST: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAG GTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
genomic: ACCAGTTGCAGGTTGACTTCCCTGAGCATTATCCTATGGAGGCACCTCAGgtctggtttt ... tcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGG
tcttctcatttcttctgttccttccatttcatttgattggactcatcttttccagGTCATTTTTCTCAATCCAGCGCCAATGCATCCACACATTTACAGCAACGGGCACATCTGCTTAG
atttgat putative branch site (score: 370)
ctcatcttttcc putative PPT
atttcattt TA-rich tract