1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgagttttcagttattcgtaagtgaatttgagttgctgtgttaatttatgctttgctgactcgaaatgctgtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAGAGCGAGGGGTACCTGTGGGGGAACAGGACTGCAGCTGTGGACTCCGAC
species | Zea mays |
transcript | GRMZM2G000393_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|78093005|gb|DV521379.1|DV521379
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|6626361|gb|AW257893.1|AW257893
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211109595|gb|FL330293.1|FL330293
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|149106895|gb|EE188795.2|EE188795
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|76920610|gb|DV168260.1|DV168260
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|31359008|gb|CD443365.1|CD443365
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211264751|gb|FL317287.1|FL317287
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211262310|gb|FL317272.1|FL317272
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|78022345|gb|DV490732.1|DV490732
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|31357853|gb|CD442210.1|CD442210
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211070150|gb|FL344929.1|FL344929
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|149096405|gb|EE182139.2|EE182139
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|22819731|gb|BU499821.1|BU499821
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211035632|gb|FL325397.1|FL325397
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211309691|gb|FL309467.1|FL309467
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211208342|gb|FL339681.1|FL339681
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211177142|gb|FL336670.1|FL336670
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211537774|gb|FL336420.1|FL336420
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211507519|gb|FL321825.1|FL321825
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211335749|gb|FL352451.1|FL352451
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211130919|gb|FL136657.1|FL136657
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211061191|gb|FL322363.1|FL322363
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211312454|gb|FL348222.1|FL348222
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|21843330|gb|BQ703911.1|BQ703911
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGTTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|149005474|gb|EE040029.2|EE040029
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211365022|gb|FL342943.1|FL342943
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|50323553|gb|CO518679.1|CO518679
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|89250822|gb|DY622608.1|DY622608
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211257460|gb|FL317713.1|FL317713
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|94479524|gb|EB708482.1|EB708482
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|149064607|gb|EE286478.2|EE286478
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|71311661|gb|DR792235.1|DR792235
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211492170|gb|FL337340.1|FL337340
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|148994442|gb|EE034088.2|EE034088
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|71435123|gb|DR816173.1|DR816173
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|71448461|gb|DR829511.1|DR829511
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCCA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCTAEST: gi|22521196|gb|BU080007.1|BU080007
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGCGGAGGACAAGCTTATTTACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211308207|gb|FL338834.1|FL338834
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211211310|gb|FL358291.1|FL358291
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|21390137|gb|BQ528186.1|BQ528186
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211401858|gb|FL337637.1|FL337637
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|78090931|gb|DV519305.1|DV519305
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|5525207|gb|AI861205.1|AI861205
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211281812|gb|FL349985.1|FL349985
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211281262|gb|FL322093.1|FL322093
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211340421|gb|FL351902.1|FL351902
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211183427|gb|FL326865.1|FL326865
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCWAGGCCAAEST: gi|211543122|gb|FL312498.1|FL312498
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGEST: gi|211510671|gb|FL361525.1|FL361525
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGG
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAKATGGACCTGACCAAGGCCAAEST: gi|67038278|gb|CO464608.1|CO464608
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211263236|gb|FL358750.1|FL358750
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211283190|gb|FL330913.1|FL330913
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211015023|gb|FL312922.1|FL312922
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211439880|gb|FL309180.1|FL309180
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAEST: gi|211120329|gb|FL321087.1|FL321087
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGEST: gi|211135055|gb|FL315830.1|FL315830
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAG
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|71436237|gb|DR817287.1|DR817287
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211425180|gb|FL347842.1|FL347842
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211528488|gb|FL328390.1|FL328390
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|71772160|gb|DR970097.1|DR970097
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211507246|gb|FL308755.1|FL308755
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|148938471|gb|EC882790.2|EC882790
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211430698|gb|FL357575.1|FL357575
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAG-TGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211325278|gb|FL366950.1|FL366950
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|211155637|gb|FL334262.1|FL334262
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|71426994|gb|DR808044.1|DR808044
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAEST: gi|149084753|gb|EE174248.2|EE174248
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
EST: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAA GGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
genomic: GTCCCGAAGGTGCTCTCGGTGGAGGACAAGCTTAGGAACCTTGGGTGCAAgtgagttttc ... gtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAA
atttgagttgctgtgttaatttatgctttgctgactcgaaatgctgtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAGAGCGAGGGGTACCTGTGGGGGAACAGGACTGCAGCTGTGGACTCCGAC
tgctgac putative branch site (score: 2)
ttaatttatgcttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgagttttcagttattcgtaagtgaatttgagttgctgtgttaatttatgctttgctgactcgaaatgctgtggtggcagGGCGATTGGAAGGAAAATTGTTGAGGCGGAGATGGACCTGACCAAGGCCAAGAGCGAGGGGTACCTGTGGGGGAACAGGACTGCAGCTGTGGACTCCGAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG