Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtactatcatataccagtgtaaatagataacttgttctgtgtctcttcatggctgcttagctaacaaacactattttgcagtcacattattctcaacctgcatcaacgtcatcaagtttgccttcaactgggggtgcagTTTTACCAGACTTCAGCTCCTAGGCAGTTCAATATGGGCTTCAGAGGCCAACCTTCCAGAGTAACCTTCCTCTCTACCAACCAGGGAATACTCTGTGGGG

Basic information

species Zea mays
transcript AC190588.3_FGT003
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AC190588.3_FGT003 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os01g02090.1 (Oryza sativa), 3'ss of exon 3
gtactatcatataccagtgtaaatagataacttgttctgtgtctcttcatggctgcttagctaaca-aacactattttgcagtcacattattctcaacctgcatcaacgtcatcaagtttgccttcaactgggggtgcagTTTTACCAGACTTCAGCTCCTAGGCAGTTCAATATGGGCTTCAGAGGCCAACCTTCCAGAGTAACCTTCCTCTCTACCAACCAGGGAATACTCTGTGGGG
         ||   || || ||| | | |  |||     |   |||| |  || ||  | || |   ||  || || ||||||| || || ||||| || |||||  | || ||||||||||||||  ||||  ||||||| || |||||| |||||||| |||||| ||||||||||||||                                                          
--------gtaccgcaatg-aaacaaaaacattgaaaaatacttctt-agagccgcacaactcatgcaattctgttctgcagTCGCACTACTCTCAGCCAGCATCGGCTTCTTCAAGTTTGCCTTCTGCTGGAAGTGCAGTATTGCCAGACCTCAGCTCCCAGGCAGCTCAATATGGGCTTC----------------------------------------------------------