1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' |
gtaaacctctaacatatcaatttcaattaatgtagcagtattatgttcaaaaaattaatgttgcaatatttcagtaaattcaaatattattgttttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTACCTTCGACTGCCCCCCTGTATCTAGTCTGATTACTAGTGCTAGTGCTACA
species | Zea mays |
transcript | GRMZM2G149802_T02 |
intron # | 26 |
splice site | 3' |
intron type | U2 |
EST: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAG ATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTAEST: gi|211402399|gb|FL354720.1|FL354720
genomic: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAGgtaaacctct ... ttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTA
EST: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAG ATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTACEST: gi|166503145|gb|EG187999.1|EG187999
genomic: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAGgtaaacctct ... ttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTAC
EST: CTGTAATCGATGACGAAGATGAGAG ATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTAEST: gi|32938785|gb|CF043604.1|CF043604
genomic: CTGTAATCGATGACGAAGATGAGAGgtaaacctct ... ttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTA
EST: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAG ATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTEST: gi|32938920|gb|CF043739.1|CF043739
genomic: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAGgtaaacctct ... ttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGT
EST: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAG ATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTEST: gi|74242013|gb|DT649927.1|DT649927
genomic: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAGgtaaacctct ... ttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGT
EST: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAG ATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTAC
genomic: CAAGATACATCTATGATGCTGTTATCTGTAATCGATGACGAAGATGAGAGgtaaacctct ... ttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTAC
aaaaattaatgttgcaatatttcagtaaattcaaatattattgttttaatgacagATATCGTGGTTGTGAACCACTGCGTTTGTCATGCCCAAGCTGTTCTGGTACCTTCGACTGCCCCCCTGTATCTAGTCTGATTACTAGTGCTAGTGCTACA
ttttaat putative branch site (score: 16)
ttgtttt CT-rich tract
aatatttcagtaaatt TA-rich tract