1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' |
gtgacatgttcagctcaagacattgatgaggcattacatattgcaccttttctttgcattgatgagcttaccgtttctaattgctgccttgcctcttcatttgttgtcctagGCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAAAGCTCTGACATTATAATCTTGGATGATGACTTCACGTCAGTTGTCAAG
species | Zea mays |
transcript | GRMZM2G132712_T01 |
intron # | 25 |
splice site | 3' |
intron type | U2 |
EST: TTGTAGCTGTTACTGGTGATGGCACAAATGATGCCCCTGCATTGCACGAG GCCGATATAGGTCTTTCAATGGGCATTTCAGGGACAGAAGTTGCTAAAGAAEST: gi|5846827|gb|AI999910.1|AI999910
genomic: TTGTAGCTGTTACTGGTGATGGCACAAATGATGCCCCTGCATTGCACGAGgtgacatgtt ... gttgtcctagGCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAA
EST: TTGTAGCTGTTACTGGTGATGGCACAAATGATGCCCCTGCATTGCACGAG GCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAAEST: gi|5325014|gb|AI783205.1|AI783205
genomic: TTGTAGCTGTTACTGGTGATGGCACAAATGATGCCCCTGCATTGCACGAGgtgacatgtt ... gttgtcctagGCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAA
EST: TTGTAGCTGTTACTGGTGATGGCACAAATGATGCCCCTGCATTGCACGAG GCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAA
genomic: TTGTAGCTGTTACTGGTGATGGCACAAATGATGCCCCTGCATTGCACGAGgtgacatgtt ... gttgtcctagGCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAA
attgatgagcttaccgtttctaattgctgccttgcctcttcatttgttgtcctagGCCGATATAGGTCTTTCAATGGGCATTTCCGGGACAGAAGTTGCTAAAGAAAGCTCTGACATTATAATCTTGGATGATGACTTCACGTCAGTTGTCAAG
ttctaat putative branch site (score: 2)
cctcttcatttgtt putative PPT
tttctaatt TA-rich tract