1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...taacatatcttggtttggtcaagggtttacttcagttttagcttgcttatttagtttaagatgcaaggtttcttgaaataattgctcttctgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCGTTCTGTGTATGTTGGAAAT
species | Zea mays |
transcript | GRMZM5G862331_T04 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|33093650|gb|CF053644.1|CF053644
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: GCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTACATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302420|gb|FL241361.1|FL241361
genomic: GCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|71427532|gb|DR808582.1|DR808582
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|28361540|gb|CB239896.1|CB239896
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302419|gb|FL241360.1|FL241360
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302415|gb|FL241356.1|FL241356
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302417|gb|FL241358.1|FL241358
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302421|gb|FL241362.1|FL241362
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|12047207|gb|BF729346.1|BF729346
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|71419429|gb|DR804766.1|DR804766
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|26559376|gb|CA831611.1|CA831611
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420260|gb|FL241373.1|FL241373
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|113701557|gb|EE679061.1|EE679061
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420264|gb|FL241377.1|FL241377
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422859|gb|FL241387.1|FL241387
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302413|gb|FL241354.1|FL241354
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: GCCGCCGCCCTCCGCGATATGCAGGTCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422855|gb|FL241383.1|FL241383
genomic: GCCGCCGCCCTCCGCGATATGCAGG-CCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|91051981|gb|EB162399.1|EB162399
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302411|gb|FL241352.1|FL241352
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|28361745|gb|CB240101.1|CB240101
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|71436658|gb|DR817708.1|DR817708
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|28361810|gb|CB240166.1|CB240166
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420263|gb|FL241376.1|FL241376
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|28987157|gb|CB351492.1|CB351492
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|26557352|gb|CA829587.1|CA829587
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302422|gb|FL241363.1|FL241363
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|78180902|gb|DV551275.1|DV551275
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|9566340|gb|BE475849.1|BE475849
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|31911181|gb|CD651796.1|CD651796
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: CGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420253|gb|FL241366.1|FL241366
genomic: CGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCTCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302412|gb|FL241353.1|FL241353
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGC-AAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|28361626|gb|CB239982.1|CB239982
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302418|gb|FL241359.1|FL241359
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211300286|gb|FL241350.1|FL241350
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302414|gb|FL241355.1|FL241355
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420256|gb|FL241369.1|FL241369
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302424|gb|FL241365.1|FL241365
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211302410|gb|FL241351.1|FL241351
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGARGCAAAGGAGCAGGTGGATGCC-EST: gi|211302416|gb|FL241357.1|FL241357
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|60355238|gb|DN222211.1|DN222211
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422858|gb|FL241386.1|FL241386
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422860|gb|FL241388.1|FL241388
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420254|gb|FL241367.1|FL241367
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|101392226|gb|EB818041.1|EB818041
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420261|gb|FL241374.1|FL241374
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|8577025|gb|BE129662.1|BE129662
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|93015249|gb|EB640769.1|EB640769
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|30087763|gb|CB885969.1|CB885969
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGTTTTTTATTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCEST: gi|211420265|gb|FL241378.1|FL241378
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCT-AGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422856|gb|FL241384.1|FL241384
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|30088074|gb|CB886279.1|CB886279
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420262|gb|FL241375.1|FL241375
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420267|gb|FL241380.1|FL241380
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|74237334|gb|DT645248.1|DT645248
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: CGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211420255|gb|FL241368.1|FL241368
genomic: CGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|89759138|gb|DY688052.1|DY688052
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211541161|gb|FL236758.1|FL236758
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|74234517|gb|DT642431.1|DT642431
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422853|gb|FL241381.1|FL241381
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|211422861|gb|FL241389.1|FL241389
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|74244706|gb|DT652620.1|DT652620
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|60351779|gb|DN218752.1|DN218752
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|87156058|gb|DY400847.1|DY400847
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|71427533|gb|DR808583.1|DR808583
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCEST: gi|22715374|gb|BU197729.1|BU197729
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
cttatttagtttaagatgcaaggtttcttgaaataattgctcttctgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCGTTCTGTGTATGTTGGAAAT
ttgctcttctgtttt CT-rich tract
tttcttgaaataatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| taacatatcttggtttggtcaagggtttacttcagttttagcttgcttatttagtttaagatgcaaggtttcttgaaataattgctcttctgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCCGTTCTGTGTATGTTGGAAAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA