1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gttagtaaattcttcttccatttgctctttattgcgctctgttctttctagatttcagccaatatataagcatggttcaaactagaacagcaagctaatatacaagcatggttcaaactagagcagcagcctgtttcaggtgctcttttttcgtaactaatcatgatcattttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATCAGAACAAGTATAAATCAATGCTTATCCGTACATATTCTACAGTATGGA
species | Zea mays |
transcript | GRMZM5G825110_T02 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|78079230|gb|DV507642.1|DV507642
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|71439838|gb|DR820888.1|DR820888
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|71426534|gb|DR807584.1|DR807584
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|76287486|gb|DV027054.1|DV027054
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|149000638|gb|EE037841.2|EE037841
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTTCCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|71426083|gb|DR807133.1|DR807133
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|93283949|gb|EB676213.1|EB676213
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|76014867|gb|DT942037.1|DT942037
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATEST: gi|78121241|gb|DV539625.1|DV539625
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
EST: TTTCTGCTTCTCATGTAGGGCGTGAAAGACGTCGCAAACATCCATCTGAG GCTACCACAGATGGAAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
genomic: TTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAGgttagtaaat ... ttttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGAT
agcagcctgtttcaggtgctcttttttcgtaactaatcatgatcattttcttcagGCTACCACAGATGGGAATAGAGCTAATGGACAACCGTTGCTTGTCAATGATCAGAACAAGTATAAATCAATGCTTATCCGTACATATTCTACAGTATGGA
aactaat putative branch site (score: 2)
tcattttcttc putative PPT
tctttttt TA-rich tract