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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaactatatttgcactgatattgaaccagttcttactgttgtatatttgctataaactttgttggtttcgtgattcttgatcgactatttttgtagTTCATTAATAGCAATTTTTTTGTTTCTGAAAAACATCCATGCACACGATTGGTAGTCTGTAAAATTAATGTCCAGACATACAGGAAAATAGAACCTA

Basic information

species Zea mays
transcript GRMZM2G365282_T01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatatttgctataaactttgttggtttcgtgattcttgatcgactatttttgtagTTCATTAATAGCAATTTTTTTGTTTCTGAAAAACATCCATGCACACGATTGGTAGTCTGTAAAATTAATGTCCAGACATACAGGAAAATAGAACCTA
                                 tcttgat  putative branch site (score: 4)
                                           ctattttt  putative PPT
         tataaacttt  TA-rich tract