1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacgctatctttccctgacagttggaagaatttgttcttggtattctcgtggttcgggagatgctgagacagttttgatgttctcgatgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTACAGGGACAAAG
species | Zea mays |
transcript | GRMZM2G329144_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211131056|gb|FL391854.1|FL391854
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211501843|gb|FL388426.1|FL388426
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCGTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211500170|gb|FL426488.1|FL426488
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAARGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211084683|gb|FL387358.1|FL387358
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTTACGGAGCTTTATCAGAAGTAEST: gi|22545491|gb|BU097850.1|BU097850
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211530013|gb|FL385894.1|FL385894
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGAGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211520783|gb|FL373488.1|FL373488
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211225829|gb|FL402237.1|FL402237
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211329903|gb|FL381786.1|FL381786
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211292210|gb|FL380933.1|FL380933
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211017372|gb|FL408588.1|FL408588
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|101391621|gb|EB817747.1|EB817747
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211278589|gb|FL376801.1|FL376801
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211060112|gb|FL393160.1|FL393160
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211009248|gb|FL416491.1|FL416491
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211530055|gb|FL388002.1|FL388002
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211525016|gb|FL424286.1|FL424286
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211284108|gb|FL384407.1|FL384407
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211214723|gb|FL394680.1|FL394680
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|8367944|gb|BE050889.1|BE050889
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: TAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|87157407|gb|DY402196.1|DY402196
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: G-AACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211458918|gb|FL402421.1|FL402421
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211147264|gb|FL387786.1|FL387786
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|60356015|gb|DN222988.1|DN222988
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211337056|gb|FL419792.1|FL419792
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|67011682|gb|CO440431.1|CO440431
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|60358353|gb|DN225326.1|DN225326
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211518880|gb|FL413873.1|FL413873
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211063314|gb|FL403455.1|FL403455
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|37379775|gb|CF626646.1|CF626646
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: CGCCTACAAATG TGGGTTCACGGAGACCAATCACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|116822363|gb|EC865760.1|EC865760
genomic: CGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCGTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211429056|gb|FL404563.1|FL404563
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCGTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211065174|gb|FL369022.1|FL369022
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211082960|gb|FL420013.1|FL420013
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTNMTCAGAAGTAEST: gi|211496470|gb|FL394442.1|FL394442
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211401198|gb|FL425445.1|FL425445
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|26558316|gb|CA830551.1|CA830551
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: AAAACTAACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|13382326|gb|BG459001.1|BG459001
genomic: AAACCT-ACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|47961660|gb|CN844369.1|CN844369
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAGACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|32919699|gb|CF024511.1|CF024511
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCGTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211341878|gb|FL422746.1|FL422746
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGWTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211209105|gb|FL370007.1|FL370007
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|61236533|gb|DN586283.1|DN586283
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGTTGACGGAGCTTTATCAGAAGTAEST: gi|211506468|gb|FL386341.1|FL386341
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211455876|gb|FL373123.1|FL373123
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211266758|gb|FL409742.1|FL409742
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211221434|gb|FL386101.1|FL386101
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211081760|gb|FL378025.1|FL378025
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211136736|gb|FL400349.1|FL400349
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211003170|gb|FL398082.1|FL398082
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211429343|gb|FL418455.1|FL418455
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211093343|gb|FL430023.1|FL430023
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211158277|gb|FL406080.1|FL406080
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211057368|gb|FL403435.1|FL403435
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTTEST: gi|211325357|gb|FL370094.1|FL370094
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGT-
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211045305|gb|FL393094.1|FL393094
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211436512|gb|FL387571.1|FL387571
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|9953563|gb|BE640146.1|BE640146
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211516379|gb|FL408121.1|FL408121
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211107550|gb|FL406867.1|FL406867
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|60341752|gb|DN208725.1|DN208725
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211466205|gb|FL385417.1|FL385417
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211408331|gb|FL399287.1|FL399287
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211439776|gb|FL418972.1|FL418972
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211317842|gb|FL424596.1|FL424596
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211146309|gb|FL420905.1|FL420905
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCGTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211026994|gb|FL377496.1|FL377496
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTAEST: gi|211227878|gb|FL402241.1|FL402241
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
EST: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATG TGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
genomic: GAAACCTACAAGGGGAAGGTCCTCCTTGTTGTTAACGTCGCCTCCAAATGgtacgctatc ... atgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTA
tattctcgtggttcgggagatgctgagacagttttgatgttctcgatgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTACAGGGACAAAG
ttttgat putative branch site (score: 294)
ttttgat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacgctatctttccctgacagttggaagaatttgttcttggtattctcgtggttcgggagatgctgagacagttttgatgttctcgatgccgtcagTGGGTTCACGGAGACCAATTACACGCAGCTGACGGAGCTTTATCAGAAGTACAGGGACAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT