1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgagcaaagcgacgtaacaatccggcttctcattttcaaacgcctctgtattctctgctgaaagagtagctcaccagacaagagctgaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGGTATGATCCAGAAACAAGCGGTGTCCATGTCGTGCTCAAGGGGCTGGTG
species | Zea mays |
transcript | GRMZM2G307906_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148948292|gb|EC893809.2|EC893809
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAGA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149029397|gb|EE286196.2|EE286196
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148948291|gb|EC893808.2|EC893808
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: CATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGAAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149069891|gb|EE158287.2|EE158287
genomic: CATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149084689|gb|EE174175.2|EE174175
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTEST: gi|148939886|gb|EC884598.2|EC884598
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCT
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148960145|gb|EE153395.2|EE153395
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA AGACCATCTGAACATCCCTGT-AGAAGGAGAAAGCACCGGGAGGCTGCEST: gi|148960914|gb|EE011604.2|EE011604
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCC-TGTTAGAAGGAGAAGGCACCGGGAGGCTGC
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149106557|gb|EE188449.2|EE188449
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148932422|gb|EC876118.2|EC876118
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149060202|gb|EE157176.2|EE157176
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148953528|gb|EE153037.2|EE153037
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148950757|gb|EC896357.2|EC896357
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148972509|gb|EE023471.2|EE023471
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCEST: gi|149107258|gb|EE189140.2|EE189140
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGC
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149061131|gb|EE157391.2|EE157391
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|18660011|gb|BM500639.1|BM500639
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148957624|gb|EC903731.2|EC903731
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149089005|gb|EE178156.2|EE178156
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148948376|gb|EC893892.2|EC893892
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|211358965|gb|FL314618.1|FL314618
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|211031208|gb|FL344488.1|FL344488
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148960572|gb|EE011188.2|EE011188
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTEST: gi|148948226|gb|EC893742.2|EC893742
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCT
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149029327|gb|EE154705.2|EE154705
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|149027056|gb|EE046378.2|EE046378
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148950756|gb|EC896356.2|EC896356
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: ATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGEST: gi|148934314|gb|EC878340.2|EC878340
genomic: ATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAGGGCACCGGGAGGCTGCTEST: gi|148952208|gb|EC898009.2|EC898009
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCT
EST: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAA GGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
genomic: AGGAATGGATCCGTATTCTTCACTGACACGAGCATGAGATACAGCAGAAAgtgagcaaag ... gaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAG
gcctctgtattctctgctgaaagagtagctcaccagacaagagctgaatttgcagGGACCATCTGAACATCCTGTTAGAAGGAGAAGGCACCGGGAGGCTGCTCAGGTATGATCCAGAAACAAGCGGTGTCCATGTCGTGCTCAAGGGGCTGGTG
agctcac putative branch site (score: 1533)
tgaattt TA-rich tract