Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...caattcttcctattggcaggagtatttggaattctagagtattgttcccatccagatagattatctctgcctaataaattatgcccattgattattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAGAAGAATAGGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT

Basic information

species Zea mays
transcript GRMZM2G181194_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G181194_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os08g44450.2 (Oryza sativa), 3'ss of exon 1
-caattcttcctattggcagg--agtatttggaattctagagtattgttcccatccagatagattatctctgcctaataaattatgcccattgattattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAGAAGAA---TAGGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT
   ||| |  ||      |||  | |  | || ||   | |   | ||||         |  |  |  |   | |  | |  | |||    | |  ||||||||||||||||   |||| ||||||||||   |||||||||| | |||  |||  ||||| ||||    ||||||||||| ||||| |||||||||||||||   
tagattatgtctgaatataggttactgatcggtataagaaatgctcgttctttgtttcctgaacaaaattcacgtgctgagct-tgcgtgatca--attgcagTAAGTTGCAGAGCGAGGTTCTCAAGGAAGCCATCTCCCAGGTTGTTGGGGAATCCAAGGAGAAGGGCAGGAAGTTCACCGAGACCGTTGAGCTTCAGATT---

upper sequence: GRMZM2G181194_T01 (Zea mays), 3'ss of exon 2
lower sequence: PP1S18_121V6.1 (Physcomitrella patens), 3'ss of exon 1
----caattcttcctattggcaggagtatttggaattctagagtattgttcccatccagatagattatc--tctgcctaataaattatgcccattgattattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAG---AAGAATAGGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT
      | | ||    ||   || ||  ||||      | |     |    ||  | ||    ||||    | |  |       ||||||    |      ||||||||| | ||   |||  | |||| |||   |||| | |||||       |  || |||   ||||||||||||||||| |||||||| |||||||||||    
atggggagttttagggtttttagtagggtttga-----ttggtagctacaacctactagtcgaattacacgtttaacggtcgtgttatgct-gctctcggctgcagTAAGCTTCAGAGCGATGTCCTCAGGGAGGCCATCACTCAGATTACCACTGCCGCTAAGGAGAAGAATAGGAAGTTCACAGAGACTGTGGAGCTTCAGATC---

upper sequence: GRMZM2G181194_T01 (Zea mays), 3'ss of exon 2
lower sequence: PP1S40_297V6.1 (Physcomitrella patens), 3'ss of exon 1
caattcttcctattggcaggagtatttggaattctagagtattgttcccatccagatagatt--atctctgcctaataaat-tatgcccattgatt--attgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAGAAGAATA---GGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT
   |   | ||  |    |||   || |    | | | |  |||||        | ||| ||  || | |  || |   |  |      |||  ||     |||||||| | ||   |||  | |||  |||   |||  | |||||       |  |||||| |||| |   ||||||||||||| ||||| ||||||||||||   
---tgagttctgct--ttggaaatttagttcctgtggtgagttgtttaatggttgttaggtttaatttgtagctgacggacgtggaatgattttttcggacgcagTAAGCTCCAGAGCGATGTCCTCCGGGAGGCCATTACGCAGATCACCACTGCGGCCAAGGAGAAGAACCGGAAGTTCACTGAAACTGTAGAGCTTCAGATT---

upper sequence: GRMZM2G181194_T01 (Zea mays), 3'ss of exon 2
lower sequence: PP1S427_1V6.1 (Physcomitrella patens), 3'ss of exon 1
caattcttcctattggcaggagtatttggaattctagagtattgttcccatccagata-gattatctctgcctaataaattatgcccattgattattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAG---AAGAATAGGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT
       |   |     | ||    |||||| |   |  ||    ||   | | | |  ||| || |    || | | |   |      |  |     ||||||| | ||    ||  |||| | |||    ||| | ||||| ||    |  ||||||   ||||||||||||||||| ||||||||||| ||||||||    
-gtcaggtaacacgaatatgaaatcttggaaattaggtttacgactctggtactgttttgatgatatggaactgaaatagagtttaatgtattctcaacagTAAGCTTCAGAGTGATGTTCTGAGGGAGGCGATCACTCAGATCGTGGCTGCAGCCAAGGAGAAGAATAGGAAGTTCACAGAGACTGTTGAACTTCAGATC---

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211379031|gb|FL141077.1|FL141077
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32841423|gb|CD981104.1|CD981104
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|5915466|gb|AW053107.1|AW053107
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32840305|gb|CD979986.1|CD979986
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381680|gb|FL141097.1|FL141097
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|50325315|gb|CO520441.1|CO520441
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379025|gb|FL141071.1|FL141071
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268450|gb|FL141050.1|FL141050
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32937941|gb|CF042760.1|CF042760
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266005|gb|FL141026.1|FL141026
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268452|gb|FL141052.1|FL141052
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211261136|gb|FL141006.1|FL141006
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266010|gb|FL141031.1|FL141031
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211261135|gb|FL141005.1|FL141005
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270883|gb|FL141057.1|FL141057
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|13126337|gb|BG316907.1|BG316907
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266015|gb|FL141036.1|FL141036
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|60347816|gb|DN214789.1|DN214789
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|76010850|gb|DT938020.1|DT938020
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263566|gb|FL141012.1|FL141012
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|67021308|gb|CO450057.1|CO450057
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270881|gb|FL141055.1|FL141055
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211540335|gb|FL091503.1|FL091503
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211384311|gb|FL141104.1|FL141104
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32841363|gb|CD981044.1|CD981044
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263572|gb|FL141018.1|FL141018
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537329|gb|FL091493.1|FL091493
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268440|gb|FL141040.1|FL141040
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|37396886|gb|CF635737.1|CF635737
EST:     GTTGATTGATCGA-TGCCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAGGGATTGCATCTCCCAGATAG-TCAGGG
genomic: GTTGATTGATCGATTG-CAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCA-GG
EST: gi|84980587|gb|DW530936.1|DW530936
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270884|gb|FL141058.1|FL141058
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268448|gb|FL141048.1|FL141048
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381681|gb|FL141098.1|FL141098
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|33093265|gb|CF053259.1|CF053259
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTNCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263563|gb|FL141009.1|FL141009
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266017|gb|FL141038.1|FL141038
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379033|gb|FL141079.1|FL141079
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32913414|gb|CF018226.1|CF018226
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCACCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379023|gb|FL141069.1|FL141069
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263571|gb|FL141017.1|FL141017
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266012|gb|FL141033.1|FL141033
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270882|gb|FL141056.1|FL141056
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379028|gb|FL141074.1|FL141074
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211540341|gb|FL091509.1|FL091509
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379029|gb|FL141075.1|FL141075
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379037|gb|FL141083.1|FL141083
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266003|gb|FL141024.1|FL141024
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266014|gb|FL141035.1|FL141035
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270890|gb|FL141064.1|FL141064
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266007|gb|FL141028.1|FL141028
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|71323607|gb|DR798478.1|DR798478
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537338|gb|FL091502.1|FL091502
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGGATTGCATCTCCCA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGG-ATTGCATCTCCCA
EST: gi|211268447|gb|FL141047.1|FL141047
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381677|gb|FL141094.1|FL141094
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537331|gb|FL091495.1|FL091495
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTTCTCAAGGATTGCATCCTCCCAGATAGTTCAG
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTT-CTCAAGGATTGCATC-TCCCAGATAGTTCAG
EST: gi|19822200|gb|BQ048224.1|BQ048224
EST:     GATCGA-TGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32841361|gb|CD981042.1|CD981042
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211384310|gb|FL141103.1|FL141103
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266009|gb|FL141030.1|FL141030
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268449|gb|FL141049.1|FL141049
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537333|gb|FL091497.1|FL091497
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGNTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266013|gb|FL141034.1|FL141034
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268444|gb|FL141044.1|FL141044
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266011|gb|FL141032.1|FL141032
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32935542|gb|CF040354.1|CF040354
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211384309|gb|FL141102.1|FL141102
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381668|gb|FL141085.1|FL141085
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379027|gb|FL141073.1|FL141073
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266008|gb|FL141029.1|FL141029
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|33102939|gb|CF062899.1|CF062899
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263567|gb|FL141013.1|FL141013
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263573|gb|FL141019.1|FL141019
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381667|gb|FL141084.1|FL141084
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266016|gb|FL141037.1|FL141037
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263564|gb|FL141010.1|FL141010
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211540338|gb|FL091506.1|FL091506
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379032|gb|FL141078.1|FL141078
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263575|gb|FL141021.1|FL141021
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381675|gb|FL141092.1|FL141092
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGAA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381673|gb|FL141090.1|FL141090
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381679|gb|FL141096.1|FL141096
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268451|gb|FL141051.1|FL141051
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|26455899|gb|CA827482.1|CA827482
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|60347533|gb|DN214506.1|DN214506
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379024|gb|FL141070.1|FL141070
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268443|gb|FL141043.1|FL141043
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32915389|gb|CF020201.1|CF020201
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211261134|gb|FL141004.1|FL141004
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381670|gb|FL141087.1|FL141087
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32862677|gb|CF002359.1|CF002359
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|67016173|gb|CO444922.1|CO444922
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270887|gb|FL141061.1|FL141061
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266006|gb|FL141027.1|FL141027
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537330|gb|FL091494.1|FL091494
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379026|gb|FL141072.1|FL141072
EST:     GGAGTTGAATTGGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCARATAGTTCAGGA
genomic: GGAGTTG-ATT-GATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211384308|gb|FL141101.1|FL141101
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381669|gb|FL141086.1|FL141086
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270880|gb|FL141054.1|FL141054
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263574|gb|FL141020.1|FL141020
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381676|gb|FL141093.1|FL141093
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270892|gb|FL141066.1|FL141066
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268445|gb|FL141045.1|FL141045
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|13126734|gb|BG317304.1|BG317304
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537334|gb|FL091498.1|FL091498
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381678|gb|FL141095.1|FL141095
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381671|gb|FL141088.1|FL141088
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379035|gb|FL141081.1|FL141081
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268441|gb|FL141041.1|FL141041
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211384312|gb|FL141105.1|FL141105
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379036|gb|FL141082.1|FL141082
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211261138|gb|FL141008.1|FL141008
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211266004|gb|FL141025.1|FL141025
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|33102985|gb|CF062945.1|CF062945
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270889|gb|FL141063.1|FL141063
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270893|gb|FL141067.1|FL141067
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263577|gb|FL141023.1|FL141023
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270894|gb|FL141068.1|FL141068
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270891|gb|FL141065.1|FL141065
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263565|gb|FL141011.1|FL141011
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211384307|gb|FL141100.1|FL141100
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211270888|gb|FL141062.1|FL141062
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|32841398|gb|CD981079.1|CD981079
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211537332|gb|FL091496.1|FL091496
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|22818734|gb|BU498824.1|BU498824
EST:     GGAGTTGATTGATCGA-TGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211379034|gb|FL141080.1|FL141080
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|91875746|gb|EB405703.1|EB405703
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381672|gb|FL141089.1|FL141089
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211381674|gb|FL141091.1|FL141091
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|71430187|gb|DR811237.1|DR811237
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211268439|gb|FL141039.1|FL141039
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|211263576|gb|FL141022.1|FL141022
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|9254594|gb|BE345077.1|BE345077
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
EST: gi|84980668|gb|DW531017.1|DW531017
EST:     GGAGTTGATTGATCGATTGCAGCCATGAG                         TAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA
genomic: GGAGTTGATTGATCGATTGCAGCCATGAGgtactctctc ... attattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcccatccagatagattatctctgcctaataaattatgcccattgattattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAGAAGAATAGGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT
                          taataaattat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
caattcttcctattggcaggagtatttggaattctagagtattgttcccatccagatagattatctctgcctaataaattatgcccattgattattgcagTAAGTTGCATTCCGAGCTTCTCAAGGATTGCATCTCCCAGATAGTTCAGGATGCCAAGAAGAATAGGAAGTTCACTGAGACTGTTGAGCTTCAGATTAGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCTT
- - - - - - - -gcaggag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgccta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tatgccc