1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgcttttctttgtcttttattcttgagttatctaatgttataccttcacatgcggcaggtctggaattatttataactaaatttagcatttcttattttctcatatttgatatagaatatgaagtatttgtttattttttactaccttgatagcttatctgtgttgatgtgatcacattttattttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
species | Zea mays |
transcript | GRMZM2G181151_T04 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|16925493|gb|BM078561.1|BM078561
genomic: GGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|32945219|gb|CF050038.1|CF050038
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|60343435|gb|DN210408.1|DN210408
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: GACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|60352479|gb|DN219452.1|DN219452
genomic: GACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: GGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|67019767|gb|CO448516.1|CO448516
genomic: GGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|37401251|gb|CF637988.1|CF637988
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|211222467|gb|FL437623.1|FL437623
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|194716931|gb|FK934090.1|FK934090
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|213188201|gb|FM181912.1|FM181912
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: AGGCAGCTCNNTAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|60395817|gb|DN228687.1|DN228687
genomic: AGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: TTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|24767815|gb|CA402951.1|CA402951
genomic: TTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCGTCTCTCTCTCGATTGATGAAGEST: gi|60396754|gb|DN229618.1|DN229618
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: GGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|32933748|gb|CF038560.1|CF038560
genomic: GGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ACATTGCTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|32942169|gb|CF046988.1|CF046988
genomic: ACATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: ATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAGEST: gi|211222468|gb|FL437624.1|FL437624
genomic: ATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
EST: CATTACTGGGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAG ATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
genomic: CATTACTGAGGGACAGATATACATTGATAGGCAGCTCCATAACAGACAGgtgcttttct ... tttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
ttactaccttgatagcttatctgtgttgatgtgatcacattttattttatttcagATTTATCCACCTATCAATGTCCTGCCATCTCTATCTCGATTGATGAAG
tgttgat putative branch site (score: 866)
ttttattttatttc putative PPT
tgatcacattttattt TA-rich tract