1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tatttattgtacctttaaatggttatttaagcaagattgcaagaatatatgaccttactgtcctagtatgacctacattccatccactttggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCAAAGAGCTTAGCTAAATCTGTTCTCGAGGAAGGTGGCTGGTCAAACTTC
species | Zea mays |
transcript | GRMZM2G179737_T03 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCGGCGCAGGTCNCGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTNCGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|18385139|gb|BM418338.1|BM418338
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|110515503|gb|EE020091.1|EE020091
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCCGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCCAACAATCTCACCEST: gi|93012420|gb|EB637940.1|EB637940
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211029480|gb|FL265541.1|FL265541
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|18385304|gb|BM418503.1|BM418503
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211039303|gb|FL265600.1|FL265600
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCA-TACCAAACAATCTCACCEST: gi|211034407|gb|FL265570.1|FL265570
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCCGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATNACCAAACAATCTCACCEST: gi|13198687|gb|BG354489.1|BG354489
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|16746010|gb|BM032440.1|BM032440
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211027041|gb|FL265533.1|FL265533
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCCGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211029491|gb|FL265552.1|FL265552
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACCEST: gi|18384807|gb|BM418006.1|BM418006
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|91054011|gb|EB164429.1|EB164429
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211031963|gb|FL265563.1|FL265563
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: CGGCGCAGGTCACGGCG-CAGCGTTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211036856|gb|FL265584.1|FL265584
genomic: CGGCGCAGGTCACGGCGCCAGCG-TTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|18384808|gb|BM418007.1|BM418007
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCTCGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211036863|gb|FL265591.1|FL265591
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCCGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|18660119|gb|BM500696.1|BM500696
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|15198881|gb|BI423536.1|BI423536
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGEST: gi|5268511|gb|AI770475.1|AI770475
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAG
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|149014431|gb|EE044038.2|EE044038
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211128891|gb|FL240344.1|FL240344
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: G-GGCGCAGGTCAC-G-GCCASCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|32831746|gb|CD971424.1|CD971424
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAG-GTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211039304|gb|FL265601.1|FL265601
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACCEST: gi|211031958|gb|FL265558.1|FL265558
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCCGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACCEST: gi|7216914|gb|AW563036.1|AW563036
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211029479|gb|FL265540.1|FL265540
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGTCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATAACCAAACAATCTCACCEST: gi|211036867|gb|FL265595.1|FL265595
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACCEST: gi|211031967|gb|FL265567.1|FL265567
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACCEST: gi|211029478|gb|FL265539.1|FL265539
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: CGGCGCAGGTCACGGCGCCAGCGTCTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|13198621|gb|BG354423.1|BG354423
genomic: CGGCGCAGGTCACGGCGCCAGCGT-TCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211036860|gb|FL265588.1|FL265588
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211036859|gb|FL265587.1|FL265587
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTRAGGAGGTAGTCCATAACCAAACAATCTCACCEST: gi|211029490|gb|FL265551.1|FL265551
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGC-AGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211079594|gb|FK945964.1|FK945964
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCCGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211027045|gb|FL265537.1|FL265537
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|20507208|gb|BQ279531.1|BQ279531
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|18384806|gb|BM418005.1|BM418005
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|71432608|gb|DR813658.1|DR813658
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|91054662|gb|EB165080.1|EB165080
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211036857|gb|FL265585.1|FL265585
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATNACCAAACAATCTCACCEST: gi|211027046|gb|FL265538.1|FL265538
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACCEST: gi|211036870|gb|FL265598.1|FL265598
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211031960|gb|FL265560.1|FL265560
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: CGGCGCAGGTCACGGCG-CAGCGTTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|19350892|gb|BM895424.1|BM895424
genomic: CGGCGCAGGTCACGGCGCCAGCG-TTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCCAGCGTTCCTG-GGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|149110590|gb|EE294202.2|EE294202
genomic: GCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCEST: gi|211027040|gb|FL265532.1|FL265532
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
EST: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGG ATTCAGCTCTGATGATGCTAAGGAGGTAGTCCAT-ACCAAACAATCTCACC
genomic: GCGGCGCAGGTCACGGCGCCAGCGTTCCTGTGGGCGCCCAAAAACTACGGgtgagtaact ... ggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACC
tatatgaccttactgtcctagtatgacctacattccatccactttggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCAAAGAGCTTAGCTAAATCTGTTCTCGAGGAAGGTGGCTGGTCAAACTTC
accttac putative branch site (score: 434)
tcctcc putative PPT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tatttattgtacctttaaatggttatttaagcaagattgcaagaatatatgaccttactgtcctagtatgacctacattccatccactttggtcctccagATTCAGCTCTGATGATGCTAAGGAGGTAGTCCATTACCAAACAATCTCACCAAAGAGCTTAGCTAAATCTGTTCTCGAGGAAGGTGGCTGGTCAAACTTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - ttgcaag
- - - - - - - - - - - - - - - - - - - - - - - - - - -cttactg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acctaca