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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtacagtatcagccttgccttcctgcttattcgcctcgtccgtccgtgcaagctcgacttatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG

Basic information

species Zea mays
transcript GRMZM2G174807_T03
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA01G42950.1 (Glycine max), 3'ss of exon 2
--------gtgagtacagtatcagccttgccttcctgcttattcgcctcgtccgtccgtgcaagctcgacttatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
         |   || |   | |  ||||   |  |  || ||    |  |  ||  ||| |   |  | | |    |||| | | |||| |  ||     ||||  | ||||||||||||||||||||||| |||||  | |||||| |||| ||||| |||||||| || || ||||| ||||| ||  |||| ||||| |
gtctctacttacctatatatttacacttggaatgtttttttttttttttttgtgtgtgtggacaatgtaataact--tggtgtttgtgtg-ataaaattgtagATTTTGGCCCCTCTTCCAATCGGGTTTGCTGTGTTTTTGGTCCACTTGGCTACCATTCCTATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTTGGTG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA02G42220.3 (Glycine max), 3'ss of exon 2
-------------------gtgagtacagtatcagccttgccttcctgcttattcgcctcgtccgtccgtgcaagctcgacttatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
                     ||  |     | |        ||   | | |          |  |   ||    ||  || ||   || || |   | || |   ||||  ||||  | || ||| | || || ||||| || |||||| | || ||| |||| |||||||||||||||||||| || |||||||| || || || ||||| |
gtaagccccccaccctctgtcgaaaatctctttaattgctttttttcgttaaaaaaaaaatactatttttgtggactaaaccta---attgtgtgggt-tgaatatatgagtagATTTTGGCACCTTTGCCTATTGGGTTCGCGGTGTTCTTGGTTCACTTGGCAACCATCCCTATCACCGGCACTGGTATCAACCCTGCTCGTAGTCTTGGTG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA11G02530.1 (Glycine max), 3'ss of exon 2
-----gtgagtacagtatcagccttgccttcctgcttattcgcctcgtccgtccgtgcaagct-cgacttatcgatggtttctttgtg-gacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
      | | |||| ||| | |  | | ||    |||| |      ||   |  |||    ||   |  ||   |||   | |||||| ||  ||     ||||  | || |||||||||||||||||||| |||||  | |||||| |||| ||||| || ||||| || || ||||| ||||| ||  |||| ||||| |
tacatataattaca-tattacctatacatttacacttaattagaatgttt-tttgtgtggactattatgtaataatgtggtgtttgtgtgataaaattgtagATTTTGGCTCCTCTTCCAATCGGGTTTGCTGTGTTTTTGGTCCACTTGGCAACCATTCCAATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTTGGTG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: Vv13s0067g00220.t01 (Vitis vinifera), 3'ss of exon 2
----------------------------gtgagtacagtatcagccttgccttcctgcttattcgcctcgtcc----gtccgtgcaagctcgactt-atcgatg--------gtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
                             |    | | | |||   |  ||  |    | | || | | |||     ||   |  |   | | |||  ||| ||        || |  || || | |  | || |||| || || ||  | ||||||||||| || |||||| | || ||| ||||||||||||| || || || |||||||||||||| || |||||||| || |
gtaagctatacatctctctgtctttctctttctcagactctcacgatcacccactcaatcactcactttgtcatcaagttaattaattattgcctttgtcggtgtgggtgatgtattattttgaatgtgttaa-agATACTGGCACCGTTGCCAATCGGGTTCGCAGTGTTCTTGGTGCACTTGGCCACCATCCCCATAACTGGAACCGGCATCAACCCAGCTCGGAGCCTGGGTG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: Vv15s0046g02410.t01 (Vitis vinifera), 3'ss of exon 2
gtgagtacagtatcagccttgccttcctgcttattcgcctcgtccgtccgtgcaagctc-------gacttatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
    || |  | ||   ||    || |  |     |      |   | ||     | ||       |||  | |  |  ||| |   || |   |    |||||  | || ||||| || || |||||||| |||||| | || || ||||| |||||||| |||||||| |||||||||||||| ||  |||| || || |
-gacgtcccctttcgctctcatttttcaaccatacctgagaattattacgaatgggatctgaaaatgacacaccctttattt-tccctgaattgaactgcagATTTTGGCTCCTCTCCCGATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTCGGGG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 2
gtgagtacagtatcagccttg---ccttcctgct--tattcgcc-tcgtccgtccg-tgcaagctcgacttatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
   | |    | |||   ||    | |||||| |  ||||     | |    |  | |   |     ||    |  |  ||| |     |  |||    |||||  | || ||||| || || |||||||| |||||| | || || ||||| |||||||| |||||||| |||||||||||||| ||  |||| || || |
-ccattttcctctcatttttcaaccattcctgatggtatttattattgcaaatgggatctgaaaataacacgccctttatttttcctgcgttgaactg-cagATTTTGGCTCCTCTCCCCATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTGGGGG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: PP1S1_535V6.2 (Physcomitrella patens), 3'ss of exon 2
--------------------gtg-agtacagtatcag----ccttgcctt---cctgcttattcgcctcgtccgtccgtgcaagctcgact-tatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
                    ||| ||| ||||   ||    ||  ||||    | ||||   |   ||        | |   || | ||   | || |     |  |  | || | |    ||| | || || |||||||| ||||| || || || ||||| || ||| |||||||||| || |||||||| || |||||||||||||| || || || || |
gtgagtacactccgtttccggtgcagttcagttctagattaccgcgcctgagacgtgctggctgatctttggtactcctcacagttagatggtctcaaaatgatgctcttcgatggacttgcagGTGCTTGCGCCTCTTCCCATCGGATTCGCAGTTTTCCTGGTGCACTTGGCCACCATTCCCATCACCGGAACTGGCATCAACCCCGCCCGTAGTCTAGGTG

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: EFJ18960 (Selaginella moellendorffii), 3'ss of exon 2
----------------------------------------------------------------------------------------------gtgagtacagtatcagccttgccttcctgcttat-tcgcctcgtccgtccgtgcaagctcgacttat---cgatggtttct--ttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
                                                                                               |   | | |||    |  |    | || ||||| ||  ||| |||    |   |   |  |  |||   | | | |  |    | |||     |  |||| |  | || || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || ||| 
gtacgtttcttcttccatccaaagctttggttgattcccctctcatgaagttttgcttttcttcttcttatcttcttgtgtggttttcctagtttttcttgctgtacttcctcttatcttctccttatctcttctcctcctcatggatagatttaagatatgttccaagctcacaaactttggcgatttctacagCTTTTGGCTCCACTTCCAATCGGGTTTGCGGTGTTCCTCGTCCACCTTGCCACGATCCCCATCACTGGCACGGGCATCAACCCAGCGCGAAGTCTCGGCT

upper sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 2
lower sequence: EFJ11572 (Selaginella moellendorffii), 3'ss of exon 2
------------------------------------------------------------------------------------------------gtgagtacagtatcagccttgccttcctgcttat-tcgcctcgtccgtccgtgcaagctcgacttat---cgatggtttct--ttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
                                                                                                 |   | | |||    |  |    | || ||||| ||  ||| |||    |   |   |  |  |||   | | | |  |    | |||     |  |||| |  | || || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || ||| 
gtacgtttctccttccatccaaagctttggttgattcccccctctcatgaagttttacttttcttcttcttatcttcttgtgtggttttcctagtttttcttgctgtacttcctcttatcttctccttatctcttctcctcctcatggatagatttaagatatgttccaagctcacaaactttggcgatttctacagCTTTTGGCTCCACTTCCAATCGGGTTTGCGGTGTTCCTCGTCCACCTTGCCACGATCCCCATCACTGGCACGGGCATCAACCCAGCGCGAAGTCTCGGCT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13490853|gb|BG517617.1|BG517617
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211244593|gb|FL017558.1|FL017558
EST:     ACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: ACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|60396403|gb|DN229272.1|DN229272
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211133462|gb|FL006440.1|FL006440
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18168522|gb|BM338362.1|BM338362
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|14245496|gb|BG874078.1|BG874078
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211179194|gb|FL462627.1|FL462627
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37384608|gb|CF629394.1|CF629394
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCATTCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37374730|gb|CF623750.1|CF623750
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|149097282|gb|EE183105.2|EE183105
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|71300563|gb|DR786333.1|DR786333
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|28984272|gb|BQ539475.2|BQ539475
EST:     TCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|28982548|gb|BQ539481.2|BQ539481
EST:     TCTTCTCCGTCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16926265|gb|BM079333.1|BM079333
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|14202907|gb|BG836584.1|BG836584
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|15590274|gb|BI674890.1|BI674890
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37396540|gb|CF635561.1|CF635561
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|5816361|gb|AI987277.1|AI987277
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16925213|gb|BM078281.1|BM078281
EST:     GAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTGGTCCACCTGGCC
genomic: GAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|31360256|gb|CD444613.1|CD444613
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|14245275|gb|BG873857.1|BG873857
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|4730363|gb|AI649529.1|AI649529
EST:     GGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: GGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|15080544|gb|BI389099.1|BI389099
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|71443561|gb|DR824611.1|DR824611
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|110947764|gb|EE167921.1|EE167921
EST:     TCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCAATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGC
genomic: TCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCC-ATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGC
EST: gi|67014181|gb|CO442930.1|CO442930
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16920133|gb|BM074516.1|BM074516
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16917263|gb|BM073207.1|BM073207
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|110949773|gb|EE169930.1|EE169930
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|14244224|gb|BG842220.2|BG842220
EST:     AACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: AACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|91867764|gb|EB399787.1|EB399787
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37386657|gb|CF630516.1|CF630516
EST:     CGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: CGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|15082754|gb|BI389438.1|BI389438
EST:     CGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: CGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16926863|gb|BM079931.1|BM079931
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|149044227|gb|EE047474.2|EE047474
EST:     TCTTTTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|91049084|gb|EB159502.1|EB159502
EST:     TCTTTTCCGCCCCCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18171530|gb|BM341370.1|BM341370
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37376353|gb|CF624693.1|CF624693
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|148935779|gb|EC879821.2|EC879821
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|111190202|gb|EE288338.1|EE288338
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCTTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16927229|gb|BM080298.1|BM080298
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|13558143|gb|BG549499.1|BG549499
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|71323598|gb|DR798469.1|DR798469
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|76282687|gb|DV022255.1|DV022255
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|78024556|gb|DV492943.1|DV492943
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|149086836|gb|EE176383.2|EE176383
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCTTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16918077|gb|BM073566.1|BM073566
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16927637|gb|BM080706.1|BM080706
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCATCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16926699|gb|BM079767.1|BM079767
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37394818|gb|CF634687.1|CF634687
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|15426902|gb|BI542724.1|BI542724
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18178436|gb|BM379646.1|BM379646
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|50322433|gb|CO517559.1|CO517559
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18179557|gb|BM380767.1|BM380767
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16925576|gb|BM078644.1|BM078644
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|37380027|gb|CF626792.1|CF626792
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18162070|gb|BM331909.1|BM331909
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211104371|gb|FL476481.1|FL476481
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCTTGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|60357965|gb|DN224938.1|DN224938
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|13558144|gb|BG549500.1|BG549500
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|28985285|gb|BQ538398.2|BQ538398
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|6681811|gb|AW287798.1|AW287798
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211528646|gb|FL444112.1|FL444112
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18166589|gb|BM336428.1|BM336428
EST:     AGGAACGCCAGGGACTCCCATGTGCAG                         A
genomic: AGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacag-
EST: gi|18166589|gb|BM336428.1|BM336428
EST:     AGGAACGCCAGGGACTCCCATGTGCAG                         A
genomic: AGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacag-
EST: gi|149094843|gb|EE180416.2|EE180416
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18163703|gb|BM333542.1|BM333542
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCATCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18176840|gb|BM351773.1|BM351773
EST:     TCTTCTCCGCCGCCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|7137543|gb|AW499146.1|AW499146
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|15323548|gb|BI478770.1|BI478770
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18168717|gb|BM338557.1|BM338557
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18175030|gb|BM350418.1|BM350418
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|149014679|gb|EE044348.2|EE044348
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18168402|gb|BM338242.1|BM338242
EST:     AACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCGTCGTCCACCTGGCC
genomic: AACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16922748|gb|BM075740.1|BM075740
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|60339166|gb|DN206139.1|DN206139
EST:     GCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: GCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16916212|gb|BM072742.1|BM072742
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|148947253|gb|EC892614.2|EC892614
EST:     TCCGCCACCGACGCCAAAGAGGAACGCCAGGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAAATCGGGTTTGCCGTGTTCTTCGTCCACCTGGC
genomic: TCCGCCACCGACGCC-AAGAGGAACGCCA-GGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCC-AATCGGGTTTGCCGTGTTCCTCGTCCACCTGGC
EST: gi|5499460|gb|AI855327.1|AI855327
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|149102980|gb|EE288339.2|EE288339
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|17932163|gb|BM269123.1|BM269123
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|60341896|gb|DN208869.1|DN208869
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|148970205|gb|EE021136.2|EE021136
EST:     TCTTTTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|28983850|gb|BQ539451.2|BQ539451
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16379888|gb|BI993202.1|BI993202
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|5928732|gb|AW055949.1|AW055949
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|60353366|gb|DN220339.1|DN220339
EST:     CGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: CGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|78106622|gb|DV525040.1|DV525040
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211528645|gb|FL444111.1|FL444111
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|78117772|gb|DV536159.1|DV536159
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|211131488|gb|FL442120.1|FL442120
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|18164435|gb|BM334274.1|BM334274
EST:     TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|148936459|gb|EC880563.2|EC880563
EST:     TCTTTTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCTTCTTCCAATCGGGTTTGCCGTGTTCTTCGTCCACCTGGCC
genomic: TCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
EST: gi|16922666|gb|BM075677.1|BM075677
EST:     TCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCG                         ATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC
genomic: TCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 376

CGACGGCCTAGGCGCCGAGATCGTCGGCACCTTCATCCTCGTCTACACCGTCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1375

CGACGGCCTAGGCGCCGAGATCGTCGGCACCTTCATCCTCGTCTACACCGTCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1002

CGACGGCCTAGGCGCCGAGATCGTCGGCACCTTCATCCTCGTCTACACCGTCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 935

CGACGGCCTAGGCGCCGAGATCGTCGGCACCTTCATCCTCGTCTACACCGTCTTCTCCGCCACCGACGCCAAGAGGAACGCCAGGGACTCCCATGTGCCGgtgagtacag ... gaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgtccgtccgtgcaagctcgacttatcgatggtttctttgtggacgaatgaacagATCCTCGCCCCTCTTCCAATCGGGTTTGCCGTGTTCCTCGTCCACCTGGCCACCATCCCTATCACCGGCACCGGCATCAACCCCGCGCGGAGCCTTGGCG
                                tttcttt  TA-rich tract