1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gcgtggtctgcagtgttttctgcttcagcctcgcactcttgtttgcagcagtgcccagttggtgtaacttgttatggctaattccattggttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGACCTTGCCAGCTGAGGAAGTTCCCCCTGAGATCCCTGAACCAGCATTAGG
species | Zea mays |
transcript | GRMZM2G172001_T02 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505029|gb|FL086837.1|FL086837
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502669|gb|FL086820.1|FL086820
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502678|gb|FL086829.1|FL086829
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505033|gb|FL086841.1|FL086841
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAATGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505030|gb|FL086838.1|FL086838
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTATGCCTTTATGGCTATTCCGATGAGACGTGGGAGGTGAEST: gi|211507391|gb|FL086853.1|FL086853
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507396|gb|FL086858.1|FL086858
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502673|gb|FL086824.1|FL086824
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505024|gb|FL086832.1|FL086832
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502677|gb|FL086828.1|FL086828
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|149042113|gb|EE047091.2|EE047091
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505027|gb|FL086835.1|FL086835
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505031|gb|FL086839.1|FL086839
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507385|gb|FL086847.1|FL086847
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502674|gb|FL086825.1|FL086825
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTCGGGAGGTGEST: gi|76921025|gb|DV168421.1|DV168421
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGT-GGGAGGTG
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502679|gb|FL086830.1|FL086830
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507386|gb|FL086848.1|FL086848
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507390|gb|FL086852.1|FL086852
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATYCCGATGAGACGTGGGAGGTGAEST: gi|78077036|gb|DV505470.1|DV505470
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505028|gb|FL086836.1|FL086836
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507388|gb|FL086850.1|FL086850
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502671|gb|FL086822.1|FL086822
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|71436584|gb|DR817634.1|DR817634
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|22935540|gb|BU571815.1|BU571815
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAAACGTGGGAGGTGAEST: gi|211502675|gb|FL086826.1|FL086826
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507392|gb|FL086854.1|FL086854
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|71426022|gb|DR807072.1|DR807072
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|71303322|gb|DR787767.1|DR787767
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507393|gb|FL086855.1|FL086855
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|26560007|gb|CA832242.1|CA832242
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAAACGTGGGAGGTGAEST: gi|211502670|gb|FL086821.1|FL086821
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507394|gb|FL086856.1|FL086856
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|87157435|gb|DY402224.1|DY402224
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAAACGTGGGAGGTGAEST: gi|211505038|gb|FL086846.1|FL086846
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|78110540|gb|DV528950.1|DV528950
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|74241423|gb|DT649337.1|DT649337
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507395|gb|FL086857.1|FL086857
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|71438530|gb|DR819580.1|DR819580
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|78110698|gb|DV529096.1|DV529096
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|71435348|gb|DR816398.1|DR816398
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|149108563|gb|EE292842.2|EE292842
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211507389|gb|FL086851.1|FL086851
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|94480407|gb|EB709365.1|EB709365
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505032|gb|FL086840.1|FL086840
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|74243375|gb|DT651289.1|DT651289
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211505035|gb|FL086843.1|FL086843
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGT-GAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|74237050|gb|DT644964.1|DT644964
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|15177432|gb|BI398386.1|BI398386
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|211502672|gb|FL086823.1|FL086823
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGAEST: gi|5555374|gb|AI881325.1|AI881325
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
EST: ATGTGGAGAGGTTCTTCAAACTCTGGGACCCCG AAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAAACGTGGGAGGTGA
genomic: ATGTGGAGAGGTTCTTCAAACTCTGTGACCCTGgtgagtgcgc ... ttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGA
cagcagtgcccagttggtgtaacttgttatggctaattccattggttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGACCTTGCCAGCTGAGGAAGTTCCCCCTGAGATCCCTGAACCAGCATTAGG
ggctaat putative branch site (score: 75)
ttgttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gcgtggtctgcagtgttttctgcttcagcctcgcactcttgtttgcagcagtgcccagttggtgtaacttgttatggctaattccattggttttgaacagAAAAGGAGAACTTGTGCCTTTATGGCTATCCCGATGAGACGTGGGAGGTGACCTTGCCAGCTGAGGAAGTTCCCCCTGAGATCCCTGAACCAGCATTAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - tctgcag
- - - - - - - - - -ctgcttc
- - - - - - - - - - - - - - - - - - -cttgttt
- - - - - - - - - - - - - - - - - - - - - - gcagcag
- - - - - - - - - - - - - - - - - - - - - - - - - -tgcccag