1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatggtgactactactgcattcatagcctgtttgccccttgagatctatggactgttgaccttatgcatgttttattttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGAGACTCTTCAGTTGCTGTCATTGTATTCGATGTTGCAA
species | Zea mays |
transcript | GRMZM2G169694_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCACGAGTTTAATTCCAAGCTATATTAGEST: gi|32919616|gb|CF024428.1|CF024428
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|148970042|gb|EE020962.2|EE020962
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|33093555|gb|CF053549.1|CF053549
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: ACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|149085277|gb|EE174782.2|EE174782
genomic: ACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|89251359|gb|DY623145.1|DY623145
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCCAGCTATATTAGEST: gi|71333158|gb|DR803614.1|DR803614
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|56462112|gb|CK986410.1|CK986410
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: ACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|148960910|gb|EE011595.2|EE011595
genomic: ACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|211199857|gb|FK959359.1|FK959359
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAEST: gi|87152147|gb|DY396936.1|DY396936
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGA
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|32870836|gb|CF010518.1|CF010518
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGEST: gi|149085276|gb|EE174781.2|EE174781
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
EST: CTGTCAAAGACAATGTCCCTTGAAGATAGAACTGTGAGACTCCAACTCTG GGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
genomic: CTGTCAAAGACAATGTACCTTGAAGATAGAACTGTGAGACTCCAACTCTGgtatggtgac ... ttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAG
tgccccttgagatctatggactgttgaccttatgcatgttttattttctttgcagGGATACTGCTGGTCAGGAAAGATTCAGGAGTTTAATTCCAAGCTATATTAGAGACTCTTCAGTTGCTGTCATTGTATTCGATGTTGCAA
tgttgac putative branch site (score: 371)
tgttttattttcttt putative PPT
atgttttattttcttt TA-rich tract