Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gttcgatatttaacaatatatatttgtggagccggtgcctcagtaattgatttggttaggcattcaagcactcatggccttgatgcattctatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT

Basic information

species Zea mays
transcript GRMZM2G168330_T02
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G168330_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os02g40880.1 (Oryza sativa), 3'ss of exon 2
gttcgatat-ttaacaatatatatttgtggagccggtgcctcagtaattgatttggttaggc-attcaagcactcatggccttgatgcattctatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT
      ||| ||| |  |    |||| |  |  ||| |        ||||   || || |   |||  |   | |||  |  || |   |   |   |||||||||||||||| || ||||| ||||||||||||||||| ||||||||  |||| || || |||||||||||||||||||||||||| || || |||||| 
--ctattatgttatcgctgctcatttttctaatcggagttaattatattgtagtgctttgattattggatatcacataactctgttttctgtgaatcaccagGCACTTGTGGATGCTCCTGACATGGTCAGGTGCCAGATCAACTTCAAGAGGCTTTCCCTGACTGACATCAAGATTGACATCAAACGTGTCCCGAAGAAGA

upper sequence: GRMZM2G168330_T02 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA10G32580.1 (Glycine max), 3'ss of exon 2
-------gttcgatatttaacaatatatatttgtggagccggtgcctcagtaattgatttggttaggcattcaagcactcatggccttgatgcattctatgg-accagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT
        | |   |   ||     ||  ||||   |        |  |   |||    || ||   | |  ||| | |  |    ||| ||      ||   |  |||||||||| || |||||||||||||| |||| |||  | || |||||| |||| || ||||| ||||||||||||||||||||  | || || |||||| 
gtaacccctccaccacccaatttcttacctttgatcacatttaagcatacccatttgcatgttt--tcttagaagtagttgtt-ttttgttgttgatgataataatagGCACTTGTCGATGCCCCTGATATGGTGAGGTCCCAAGTCAATTTCAAAAGGCTTTCCCTTACCGACATCAAGATTGACATCAAGAGGGTCCCTAAGAAGA

upper sequence: GRMZM2G168330_T02 (Zea mays), 3'ss of exon 2
lower sequence: Vv05s0049g01310.t01 (Vitis vinifera), 3'ss of exon 3
-gttcgatatttaacaatatatatttgtggagccggtgcctcagtaattgatttggt-taggcattcaagcactcatggccttga--tgcattctatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT
  ||  | | || | || ||  ||||    ||  |    ||  ||  ||  |||  | ||   |    | || | |  |  |  |  || || |  ||   ||||| ||||||||||| ||||||||||| || ||||| || ||||| ||  |||| ||||| || || ||||| |||||||||||| | || || |||||  
attttcaaaattgataa-atggattttgaaagatgtatactgggtgttttctttaatgtaaagagattatcaattacagagtgcaattggataccttg---cagGCCCTTGTGGACGCACCTGATATGGTGAGATGCCAAATGAACTTTAAGAGGCTTTCACTCACAGATATCAAAATTGACATCAAAAGGGTGCCTAAGAAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211359619|gb|FK995532.1|FK995532
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|78025604|gb|DV493991.1|DV493991
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211080917|gb|FK995370.1|FK995370
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211356966|gb|FK995522.1|FK995522
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211069962|gb|FK995312.1|FK995312
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|9255102|gb|BE345570.1|BE345570
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211362282|gb|FK995547.1|FK995547
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|29130664|gb|CB381368.1|CB381368
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211067220|gb|FK995294.1|FK995294
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211210863|gb|FK995469.1|FK995469
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCANAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|18654747|gb|BM499552.1|BM499552
EST:     ATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: ATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|29945946|gb|CB815900.1|CB815900
EST:     GACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: GACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|166649223|gb|EG158892.1|EG158892
EST:     AGACTACGGCCGCCTCGTACGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGC
genomic: AGACTACGGCCGCCTCGT-CGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGC
EST: gi|211083655|gb|FK995389.1|FK995389
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60341766|gb|DN208739.1|DN208739
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211200582|gb|FK995414.1|FK995414
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|30031553|gb|CB833404.1|CB833404
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|120480700|gb|EH210966.1|EH210966
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211213430|gb|FK995481.1|FK995481
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|120480782|gb|EH211015.1|EH211015
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTACCAGATTAACTTCAWACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60395137|gb|DN228006.1|DN228006
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211210869|gb|FK995475.1|FK995475
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|4885817|gb|AI676937.1|AI676937
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|5439488|gb|AI820409.1|AI820409
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|67020174|gb|CO448923.1|CO448923
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211362278|gb|FK995543.1|FK995543
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211216008|gb|FK995501.1|FK995501
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCNAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211083641|gb|FK995375.1|FK995375
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGGCGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211200573|gb|FK995405.1|FK995405
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|20506726|gb|BQ279317.1|BQ279317
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|29945948|gb|CB815901.1|CB815901
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211078178|gb|FK995352.1|FK995352
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211197713|gb|FL091650.1|FL091650
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211078176|gb|FK995350.1|FK995350
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60338249|gb|DN205222.1|DN205222
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211478439|gb|FL475437.1|FL475437
EST:     CCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: CCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211078184|gb|FK995358.1|FK995358
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211208303|gb|FK995460.1|FK995460
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|8665654|gb|BE186470.1|BE186470
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|9255101|gb|BE345569.1|BE345569
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211075431|gb|FK995330.1|FK995330
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|120480800|gb|EH211027.1|EH211027
EST:     AAGACTACGGCCGCCTCGTCGTCATCGWCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCC
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCC
EST: gi|211362275|gb|FK995540.1|FK995540
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|29130747|gb|CB381451.1|CB381451
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211198038|gb|FK995403.1|FK995403
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|30031552|gb|CB833403.1|CB833403
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|5456090|gb|AI833780.1|AI833780
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211197710|gb|FL091647.1|FL091647
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|32912785|gb|CF017597.1|CF017597
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211072702|gb|FK995327.1|FK995327
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60358103|gb|DN225076.1|DN225076
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211192906|gb|FL091622.1|FL091622
EST:     AAGRCTASGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACMGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|18654746|gb|BM499551.1|BM499551
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211067215|gb|FK995289.1|FK995289
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|32851036|gb|CD990717.1|CD990717
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|9743082|gb|BE519230.1|BE519230
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211213431|gb|FK995482.1|FK995482
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211359613|gb|FK995526.1|FK995526
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211203138|gb|FK995424.1|FK995424
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211359624|gb|FK995537.1|FK995537
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60393992|gb|DN226862.1|DN226862
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211072692|gb|FK995317.1|FK995317
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211072704|gb|FK995329.1|FK995329
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|18661729|gb|BM501549.1|BM501549
EST:     ATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: ATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|9743083|gb|BE519231.1|BE519231
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211359612|gb|FK995525.1|FK995525
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211072698|gb|FK995323.1|FK995323
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211210868|gb|FK995474.1|FK995474
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|9028642|gb|BE238682.1|BE238682
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211195304|gb|FL091632.1|FL091632
EST:     AGACTACGGCCGCCTCGTCGNCATCCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGGATATGGTCAGGTGCCAGATTAACTTCAAACG
genomic: AGACTACGGCCGCCTCGTCGTCATC-GTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTG-ATATGGTCAGGTGCCAGATTAACTTCAAACG
EST: gi|211198032|gb|FK995397.1|FK995397
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|31997798|gb|CD661777.1|CD661777
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211205720|gb|FK995443.1|FK995443
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211356962|gb|FK995518.1|FK995518
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211195306|gb|FL091634.1|FL091634
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         KCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60350453|gb|DN217426.1|DN217426
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|15209034|gb|BI430918.1|BI430918
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211210865|gb|FK995471.1|FK995471
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211216002|gb|FK995495.1|FK995495
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGAYGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211208307|gb|FK995464.1|FK995464
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGCGTCAGGTGCCAGATTAACTTCAAACG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATG-GTCAGGTGCCAGATTAACTTCAAACG
EST: gi|211205717|gb|FK995440.1|FK995440
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|5108454|gb|AI740167.1|AI740167
EST:     GTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: GTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60338970|gb|DN205943.1|DN205943
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211210864|gb|FK995470.1|FK995470
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211203139|gb|FK995425.1|FK995425
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211069961|gb|FK995311.1|FK995311
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211213437|gb|FK995488.1|FK995488
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|149038559|gb|EE155486.2|EE155486
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60398623|gb|DN231439.1|DN231439
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211078173|gb|FK995347.1|FK995347
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60343605|gb|DN210578.1|DN210578
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211075439|gb|FK995338.1|FK995338
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211208295|gb|FK995452.1|FK995452
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|5455957|gb|AI833647.1|AI833647
EST:     AAGACTATGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|29947552|gb|CB816716.1|CB816716
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|60351224|gb|DN218197.1|DN218197
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211356954|gb|FK995510.1|FK995510
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211195300|gb|FL091628.1|FL091628
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         SCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211213442|gb|FK995493.1|FK995493
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211198025|gb|FK995390.1|FK995390
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211083651|gb|FK995385.1|FK995385
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|29577132|gb|CB617244.1|CB617244
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|15313730|gb|BI478928.1|BI478928
EST:     AGACTTACGG-CG-CTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AGAC-TACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211205715|gb|FK995438.1|FK995438
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
EST: gi|211374874|gb|FL313285.1|FL313285
EST:     AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGG                         GTACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG
genomic: AAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1280

GTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTTGTGAACTACGGCAAAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1392

GTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTTGTGAACTACGGCAAAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 1380

GTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTTGTGAACTACGGCAAAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 605

GTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTTGTGAACTACGGCAAAGACTACGGCCGCCTCGTCGTCATCGTCGATGTGGTCGACCAGAACAGGgtatgtactg ... tatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attgatttggttaggcattcaagcactcatggccttgatgcattctatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT
                                         attctat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttcgatatttaacaatatatatttgtggagccggtgcctcagtaattgatttggttaggcattcaagcactcatggccttgatgcattctatggaccagGCACTTGTGGACGCCCCTGATATGGTCAGGTGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - -aacaata
- - - - - - - - - - - - - - - -ccggtgc
- - - - - - - - - - - - - - - - - - - - - - - -tgatttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcattca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcactca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcattc