1 5' 3' | 2 5' 3' |
gtacacccatatgttcacctggaatatagttaaaataaattcccagaacatgaaagcaacaagcagaaaagcaacgaagaagaaatagaaacgaaatggaatgtttactggatcgatgctgatggatatataattgtgcatgcacacgtacgtacgtgcagGAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGAGAGGGACCGCGACGACCCCCGCTACGTCATCACCACCTACGACGGCGTC
species | Zea mays |
transcript | GRMZM2G163054_T02 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAG GAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGAEST: gi|110519092|gb|EE023679.1|EE023679
genomic: AAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAGgtacacccat ... gtacgtgcagGAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGA
EST: AAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAG GAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCCTGAAGAAGCGGGTGGAEST: gi|148972718|gb|EE023678.2|EE023678
genomic: AAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAGgtacacccat ... gtacgtgcagGAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGA
EST: AAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAG GAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGA
genomic: AAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAGgtacacccat ... gtacgtgcagGAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGA
actggatcgatgctgatggatatataattgtgcatgcacacgtacgtacgtgcagGAACTACTACCGCTGCTCGTCGGAGGGCTGCGGCGTGAAGAAGCGGGTGGAGAGGGACCGCGACGACCCCCGCTACGTCATCACCACCTACGACGGCGTC
tgctgat putative branch site (score: 10)
atggatatataatt TA-rich tract