1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...gagcccaaatggtatgatctacaaatttacatgtgccattttgatttttcttgctttctgatatgacttctaagacttgttttgacatatctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTATGGCAAGTATGACGCTCGAGGATGTTCGTGTTAAAAGTGCAGATACTT
species | Zea mays |
transcript | GRMZM2G152438_T02 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|13237158|gb|BG355172.1|BG355172
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|33467320|gb|CF244369.1|CF244369
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|50324428|gb|CO519554.1|CO519554
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211117745|gb|FL295806.1|FL295806
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32808720|gb|CD960954.1|CD960954
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|91057156|gb|EB167574.1|EB167574
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TGGTTCTGAAATGGCTGATGAGGACTCATCCGACTTCCCCCTTCTGCAGC GTTAGTTCTGCCAGAAAAATGACEST: gi|211116957|gb|FL295792.1|FL295792
genomic: TGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACC-TTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGC-AGAAAA-TGAC
EST: TTGGCTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCCEST: gi|78122154|gb|DV540538.1|DV540538
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCC-
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116962|gb|FL295797.1|FL295797
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|71433873|gb|DR814923.1|DR814923
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211377342|gb|FK960876.1|FK960876
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTTAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACAGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32796484|gb|CD948720.1|CD948720
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116162|gb|FL295780.1|FL295780
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGCTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|149088304|gb|EE177398.2|EE177398
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116963|gb|FL295798.1|FL295798
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAGAATGACAGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32796008|gb|CD948244.1|CD948244
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32798898|gb|CD951134.1|CD951134
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116169|gb|FL295787.1|FL295787
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAGAGCCATTCCTEST: gi|71431621|gb|DR812671.1|DR812671
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|148933116|gb|EC876752.2|EC876752
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211117743|gb|FL295804.1|FL295804
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGCTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|149078224|gb|EE166978.2|EE166978
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116966|gb|FL295801.1|FL295801
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTNAAGCCATTCCTEST: gi|50324025|gb|CO519151.1|CO519151
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG -TT----CTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211117746|gb|FL295807.1|FL295807
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|71422888|gb|DR805891.1|DR805891
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116953|gb|FL295788.1|FL295788
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TGGCTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCEST: gi|211116955|gb|FL295790.1|FL295790
genomic: TGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTT-CTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCC
EST: TTGGCTCTGAGATGGCTGATGAGGACTCATCCGAMTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACEST: gi|101389349|gb|EB816629.1|EB816629
genomic: T-GGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGAC
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|78081711|gb|DV510123.1|DV510123
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG -TT----CTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211377341|gb|FK960875.1|FK960875
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG -TT----CTGCAGAAAATGACAGTCAACCAGAATEST: gi|71436518|gb|DR817568.1|DR817568
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAAT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32797706|gb|CD949942.1|CD949942
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32796232|gb|CD948468.1|CD948468
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211116168|gb|FL295786.1|FL295786
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGCTCTGAGATGGCTGATGAGGACTCATCCGASTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTEST: gi|78077674|gb|DV506108.1|DV506108
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|13237362|gb|BG355376.1|BG355376
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32799036|gb|CD951272.1|CD951272
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211117744|gb|FL295805.1|FL295805
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TGGCTCTGAGATGGCTGATGAGGACTCATCCCGACTTCACCTTCTGCAGG GTTTAGTTCTGCAGAAAAATGACGGTCAAEST: gi|71439167|gb|DR820217.1|DR820217
genomic: TGGTTCTGAGATGGCTGATGAGGACTCATCC-GACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTT-AGTTCTGCAGAAAA-TGACGGTCAA
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|211117748|gb|FL295809.1|FL295809
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGCTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAEST: gi|76014565|gb|DT941735.1|DT941735
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAA
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTEST: gi|32797377|gb|CD949613.1|CD949613
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGGTGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATTTCCTAAAGCCATTCCTEST: gi|89761685|gb|DY689600.1|DY689600
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
EST: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGG GTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
genomic: TTGGTTCTGAGATGGCTGATGAGGACTCATCCGACTTCACCTTCTGCAGGgtatgcacgc ... ctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCT
ttttcttgctttctgatatgacttctaagacttgttttgacatatctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTATGGCAAGTATGACGCTCGAGGATGTTCGTGTTAAAAGTGCAGATACTT
ttttgac putative branch site (score: 3)
tatcttttttt CT-rich tract
acatatcttttttta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gagcccaaatggtatgatctacaaatttacatgtgccattttgatttttcttgctttctgatatgacttctaagacttgttttgacatatctttttttagGTTAGTTCTGCAGAAAATGACGGTCAACCAGAATCTCCTAAAGCCATTCCTATGGCAAGTATGACGCTCGAGGATGTTCGTGTTAAAAGTGCAGATACTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT