Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG

Basic information

species Zea mays
transcript GRMZM2G152328_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os03g50885.1 (Oryza sativa), 3'ss of exon 1
gtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
||||||     |  |  |||     |||   |   |  | |  | ||  |    |  |||   |  |||    |          | |||||||||||||| || || || || || ||||| |||||||||||||| || || ||||| |||||||| |||||||||||||| ||||| ||||||||||
gtaagctgtttggatc-tcagggtggtttccgtttac-cgaaatgct--gcatttcttggtagcaaaac--tgaggtggtttgtgtcagGCTGGGTTCGCCGGAGATGATGCGCCCAGGGCTGTCTTCCCCAGCATTGTCGGCCGCCCTCGCCACACCGGTGTCATGGTCGGAATGGGCCAGAAGGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: EDO98923 (Chlamydomonas reinhardtii), 3'ss of exon 1
----------gtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggc-tgctgg-ggccctaacaacaacaccaacctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
           |  ||    ||  |||      |    |     |  ||   ||||  |    | || ||  |||  |  |     | ||    || ||||||||| || ||||| || || |||||  | || || ||||||  ||||||||| || || |||||||| ||||| |||||||||||||| ||||||    
tccatttaacttgggcgttgggcctggcgtgggccccgcgctgcagcgcgttgttcgagcaaacctgatgctggcgatcgctgtgtcgccg-tgtccgcagGCTGGCTTTGCTGGTGATGATGCCCCTCGCGCTGTGTTCCCCTCCATCGTGGGCCGGCCCCGCCACACCGGTGTGATGGTCGGGATGGGCCAGAAG----

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S372_48V6.1 (Physcomitrella patens), 3'ss of exon 1
------------gtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
            | |    |  ||  ||   |   | | | ||||          || | |     | |  ||  ||  |    ||   |||   | ||||||||| |||||  | ||||| |||||  |||| || |||||||||||||||||||| ||| | ||||| || || ||||| || ||||| ||||| ||||
gcatagcactgtgcattataaaggcatgaa-atcccagcttttgatggcattttattgttgaataattccaggcgccggaattgaatttcaattgccgcagGCTGGTTTCGCCAGAGACGATGCCCCCCGGGCTGTTTTCCCCAGCATCGTGGGGCGGCCGAGGCACACCGGAGTGATGGTGGGCATGGGACAGAAAGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S337_21V6.2 (Physcomitrella patens), 3'ss of exon 3
-----gtaagccaccggtt----tggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaac-aacaacaccaacctcg--gcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
      |    |     ||    ||| || |  |    |  ||| |      |  ||  |  ||   |   |  |    ||        |  |    ||||||||| |||||||| ||||| || ||  | || || ||||||||||| || ||||||||  | |||||||| || |||||||| ||||| ||||||||||
ctcttttgcatctttatttataatgggcagacattggatgtagactaatttatgatcaatc-ctctcgaaactgtgtttaattttggtgaattgaacgcagGCTGGTTTCGCTGGAGACGATGCTCCCCGCGCTGTTTTCCCCAGCATTGTTGGGCGCCCCAGGCACACTGGAGTGATGGTCGGTATGGGACAGAAGGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S198_154V6.3 (Physcomitrella patens), 3'ss of exon 2
-----------gtaagccaccggtttg----gtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
           |    ||  |  |||      |||| ||   | |   || | ||    ||| |     || || |    |||  ||      |   |  ||||||||| |||||||| || ||||||||  | ||||| || || ||||||||||| || ||| | ||||||||||| |||||||| ||||| ||||||||||
aaccttaacttgcgtaccctcaatttttatcatcacttcatctgtctggagttcacatctcttgtaacatgatgag----taatcacgtgcggattttatgcagGCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTGGGACGGCCGAGGCACACTGGTGTGATGGTCGGTATGGGACAGAAGGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S198_157V6.3 (Physcomitrella patens), 3'ss of exon 2
---------------------------------------------------------------------------------------gtaagcca--ccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaaca-------acaacaccaacctcg-gcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
                                                                                        |  ||||  | || | | |  | ||  ||||| | |  |     |    |    | ||      ||||| |       |     |  |  |   ||||||||| |||||||| || ||||||||  | ||||| || || ||||||||||| || ||| | ||||||||||| |||||||| ||||| ||||||||||
gtatgatattaactgttttgatgatgcatttgtattctccctatgtgatgaagtggcttgcaataaaatgcagttctaaagcatgtcatgggccaagctgggtcgttatcgtc--ttcttcacatcgtggtatctctgtgatcggcacaaaacctaaaatgttggtattgtgcggattttatgcagGCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTGGGACGGCCGAGGCACACTGGTGTGATGGTCGGTATGGGACAGAAGGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S337_26V6.1 (Physcomitrella patens), 3'ss of exon 2
---------gtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcg--gcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
          ||      || |   |  |   || |||  | || | ||    |   |       |     |      ||        |  |    ||||||||| |||||||| ||||| || ||  | || || ||||||||||| || ||||||||  | |||||||| || |||||||| ||||| ||||||||||
caattcatgctataatggcgttcatgataatactattcaagtgacttcagttgtgctgtccagaacgaaaccgtgtttaattgtggtgaattgaacgcagGCTGGTTTCGCTGGAGACGATGCTCCCCGCGCTGTTTTCCCCAGCATTGTTGGGCGCCCCAGGCACACTGGAGTGATGGTCGGTATGGGACAGAAGGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S372_38V6.1 (Physcomitrella patens), 3'ss of exon 2
-----------------------------------------------------------------------------gtaagccac-cggtttggtcacatctgttcttgagaatgcaa-ggttctcggtg-gctgctggggccctaacaacaacaccaacctcg-----gcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
                                                                              ||||  ||   || || |||    |  |  |    |   |  ||| ||| |     |||       || | |  |   |     |       ||||||||| ||||| || ||||| |||||  |||| || |||||||||||||||||||| ||| | ||||| || || ||||| || ||||| ||||| ||||
gtatgcatgcttaccgcatatacgactgtaattctcccatgcaaatcgagcatgctaacaatcgcgccttgcatttgctaaggtacattgtctgatcaatcatagtactatatacatatcggtcctctgcataatgcgcaaaatctgaaattaggtctggtttatttggcgcagGCTGGTTTCGCCGGAGACGATGCCCCCCGGGCTGTTTTCCCCAGCATCGTGGGGCGGCCGAGGCACACCGGAGTGATGGTGGGCATGGGACAGAAAGACG

upper sequence: GRMZM2G152328_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S198_157V6.1 (Physcomitrella patens), 3'ss of exon 2
---gtaagcca--ccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaaca-------acaacaccaacctcg-gcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
    |  ||||  | || | | |  | ||  ||||| | |  |     |    |    | ||      ||||| |       |     |  |  |   ||||||||| |||||||| || ||||||||  | ||||| || || ||||||||||| || ||| | ||||||||||| |||||||| ||||| ||||||||||
gtcatgggccaagctgggtcgttatcgtc--ttcttcacatcgtggtatctctgtgatcggcacaaaacctaaaatgttggtattgtgcggattttatgcagGCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTGGGACGGCCGAGGCACACTGGTGTGATGGTCGGTATGGGACAGAAGGACG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211391310|gb|FL330077.1|FL330077
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211422125|gb|FL330493.1|FL330493
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCRGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211046893|gb|FL341766.1|FL341766
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211157728|gb|FL360808.1|FL360808
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211077505|gb|FL307130.1|FL307130
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211314060|gb|FL325144.1|FL325144
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211287612|gb|FL250247.1|FL250247
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCC-GAGGGSCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211344319|gb|FL310881.1|FL310881
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGG-CGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211285129|gb|FL337146.1|FL337146
EST:     MMGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATRGTCAAG                         GCTGGGTTMGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211287611|gb|FL250246.1|FL250246
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211532043|gb|FL347056.1|FL347056
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211280214|gb|FL366624.1|FL366624
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211308708|gb|FL364506.1|FL364506
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211340147|gb|FL341977.1|FL341977
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|8273069|gb|BE012164.1|BE012164
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211407470|gb|FL353814.1|FL353814
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211134154|gb|FL319319.1|FL319319
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTKGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211444448|gb|FL323468.1|FL323468
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211470853|gb|FL358528.1|FL358528
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|67017533|gb|CO446282.1|CO446282
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211468126|gb|FL352527.1|FL352527
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211059308|gb|FL364336.1|FL364336
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211287613|gb|FL250248.1|FL250248
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211543078|gb|FL311080.1|FL311080
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211210333|gb|FL310322.1|FL310322
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211531503|gb|FL328874.1|FL328874
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211088879|gb|FL336470.1|FL336470
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211307986|gb|FL326513.1|FL326513
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|14242811|gb|BG840625.2|BG840625
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211210817|gb|FL334771.1|FL334771
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACG-CCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211532538|gb|FL366389.1|FL366389
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGNTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211188115|gb|FL321601.1|FL321601
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCKACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211413966|gb|FL312342.1|FL312342
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCSGCKACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211351953|gb|FL331044.1|FL331044
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGCGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211226828|gb|FL341084.1|FL341084
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211301728|gb|FL323898.1|FL323898
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|5566832|gb|AI881743.1|AI881743
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211469613|gb|FL315638.1|FL315638
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211264639|gb|FL311275.1|FL311275
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|8103408|gb|AW928047.1|AW928047
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211340157|gb|FL341987.1|FL341987
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGMTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211116610|gb|FL350322.1|FL350322
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211495423|gb|FL352081.1|FL352081
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211424736|gb|FL330505.1|FL330505
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211205587|gb|FL329102.1|FL329102
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211040749|gb|FL336916.1|FL336916
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCKT-GCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCG-C-TGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCG
EST: gi|211475216|gb|FL333752.1|FL333752
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211440519|gb|FL343491.1|FL343491
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211393908|gb|FL329734.1|FL329734
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGAMGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTGGGGCGCCCGCGCCACACTGGTGTCATGGTCGGGATGGGGCAGAAGGACG
                            ccctaac  putative branch site (score: 2)