1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gttccccccgccgcctttgcttcccgcacgatctcgatctccgttttcccacctctaacgtctgctgccccgagcactagcctctgattcgatgccatctataccctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGGACCTCGAGCGCGCCGGAGGGGTCGAGAGTGGGACCCTCACCGTCGATG
species | Zea mays |
transcript | GRMZM2G144372_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGG-GGCAGATCEST: gi|211396451|gb|FL097332.1|FL097332
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATC
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAG-CAGATCGAGEST: gi|71428528|gb|DR809578.1|DR809578
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211396449|gb|FL097330.1|FL097330
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|67038589|gb|CO464901.1|CO464901
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211396455|gb|FL097336.1|FL097336
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|13177876|gb|BG349059.1|BG349059
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211419024|gb|FL311427.1|FL311427
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|89758156|gb|DY687449.1|DY687449
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|148982506|gb|EE028351.2|EE028351
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211396448|gb|FL097329.1|FL097329
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTMACACAAGATCCGGAG-CAGATCGAGEST: gi|76012958|gb|DT940128.1|DT940128
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|67023340|gb|CO452089.1|CO452089
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: CGTCGGCACCCTCGACTAGATTGC-GGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|9824919|gb|BE575016.1|BE575016
genomic: CGTCGGCACCCTCGACTCGCTT-CTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211396452|gb|FL097333.1|FL097333
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|116818640|gb|EC861688.1|EC861688
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211396454|gb|FL097335.1|FL097335
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|211396456|gb|FL097337.1|FL097337
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAG-CAGATCGAGEST: gi|15312777|gb|BI478368.1|BI478368
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGAEST: gi|33104344|gb|CF064304.1|CF064304
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGA
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGEST: gi|21987710|gb|BQ779238.1|BQ779238
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
EST: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAG TCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
genomic: GCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGgttccccccg ... ctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAG
tctgctgccccgagcactagcctctgattcgatgccatctataccctgcccgcagTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATCGAGGACCTCGAGCGCGCCGGAGGGGTCGAGAGTGGGACCCTCACCGTCGATG
ctctgat putative branch site (score: 312)
ccctgccc putative PPT
atctata TA-rich tract