1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...atatctgcatgcaaacactaaacgtttccagtcatagtttatagttgtcttaaccatgtaccttgccttggtttataatgagcattttttcccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTTGTGCAACAACTTG
species | Zea mays |
transcript | GRMZM2G143651_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398065|gb|FL169347.1|FL169347
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|29947686|gb|CB816784.1|CB816784
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395443|gb|FL169333.1|FL169333
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398057|gb|FL169339.1|FL169339
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|8367566|gb|BE050511.1|BE050511
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395442|gb|FL169332.1|FL169332
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395441|gb|FL169331.1|FL169331
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGG-CACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392815|gb|FL169318.1|FL169318
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|22545624|gb|BU097983.1|BU097983
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149064147|gb|EE286443.2|EE286443
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|67037324|gb|CO464172.1|CO464172
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31348826|gb|CD433183.1|CD433183
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGCGTTTGGAGCTACTGGGTTTCTTGTTCTCTATCTEST: gi|149074514|gb|EE162909.2|EE162909
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398061|gb|FL169343.1|FL169343
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|148939122|gb|EC883548.2|EC883548
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211390183|gb|FL169301.1|FL169301
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398056|gb|FL169338.1|FL169338
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|20802704|gb|BQ293754.1|BQ293754
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149086938|gb|EE176480.2|EE176480
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398063|gb|FL169345.1|FL169345
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|30087963|gb|CB886168.1|CB886168
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|78087119|gb|DV515512.1|DV515512
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|32850829|gb|CD990510.1|CD990510
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|148977668|gb|EE026094.2|EE026094
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|21809651|gb|BQ667969.1|BQ667969
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGTATGTCTTCTGTGAG TGCAATTGTAGCCACGGAGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|148963040|gb|EE013991.2|EE013991
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|148931470|gb|EC874468.2|EC874468
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398062|gb|FL169344.1|FL169344
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|50322405|gb|CO517531.1|CO517531
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398070|gb|FL169352.1|FL169352
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGNAGG-AGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149096347|gb|EE182072.2|EE182072
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395433|gb|FL169323.1|FL169323
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGTCCGGGCATCTCGTCCGCAATGGCACCGGNATGGAGGTCTTCTGTRAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149069994|gb|EE158394.2|EE158394
genomic: GGTCCGGGCATCTCGTCCGCAAGGGCACCGG-AGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392819|gb|FL169322.1|FL169322
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31354660|gb|CD439017.1|CD439017
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392813|gb|FL169316.1|FL169316
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149077783|gb|EE166504.2|EE166504
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31664374|gb|CD573099.1|CD573099
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398060|gb|FL169342.1|FL169342
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31911131|gb|CD651773.1|CD651773
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|30031665|gb|CB833516.1|CB833516
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31348834|gb|CD433191.1|CD433191
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392811|gb|FL169314.1|FL169314
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149069952|gb|EE158352.2|EE158352
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|50322403|gb|CO517529.1|CO517529
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTACCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395446|gb|FL169336.1|FL169336
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGG-CACCGTAGG-AGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392814|gb|FL169317.1|FL169317
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392809|gb|FL169312.1|FL169312
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGG-CACCGNAGG-AGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392810|gb|FL169313.1|FL169313
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31358221|gb|CD442578.1|CD442578
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|9794698|gb|BE553006.1|BE553006
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211390188|gb|FL169306.1|FL169306
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211022386|gb|FL169353.1|FL169353
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|32805463|gb|CD957697.1|CD957697
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398066|gb|FL169348.1|FL169348
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211390184|gb|FL169302.1|FL169302
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: ATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGNGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149013853|gb|EE043334.2|EE043334
genomic: ATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149106264|gb|EE291962.2|EE291962
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395437|gb|FL169327.1|FL169327
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211398069|gb|FL169351.1|FL169351
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGTAGG-AGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|71773401|gb|DR971305.1|DR971305
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395438|gb|FL169328.1|FL169328
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|71445608|gb|DR826658.1|DR826658
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392806|gb|FL169309.1|FL169309
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|29577180|gb|CB617292.1|CB617292
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|149055287|gb|EE156221.2|EE156221
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211395436|gb|FL169326.1|FL169326
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGNAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|31612343|gb|CD568965.1|CD568965
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211022388|gb|FL169355.1|FL169355
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAAGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTEST: gi|211392808|gb|FL169311.1|FL169311
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCT
EST: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAG TGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGG
genomic: GGGTCCGGGCATCTCGTCCGCAAGGGCACCGGAGGGAGGTCTTCTGTGAGgtgaacattc ... cccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGG
tgtcttaaccatgtaccttgccttggtttataatgagcattttttcccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTTGTGCAACAACTTG
tcttaac putative branch site (score: 613)
cattttttccctt putative PPT
tttataatga TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| atatctgcatgcaaacactaaacgtttccagtcatagtttatagttgtcttaaccatgtaccttgccttggtttataatgagcattttttcccttaatagTGGAATTGTAGCCACGGTGTTTGGAGCTACTGGGTTTCTTGGGCGCTATCTTGTGCAACAACTTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - -tgcatgc
- - - - - - -aacacta
- - - - - - - - - - - - - - - - - - - - - - - - - - -ccatgta