1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...ttttgtttacttcagttcctatactagatgaccacatggtctttttgaatgaccttttggaaagggaagtattttttgaccaagaaagtgtcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACGAAGCTGCAAGTTCTATCTCTACGCCAGATCAGGCCTCAGCTAGAAGAC
species | Zea mays |
transcript | GRMZM2G138176_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|31360411|gb|CD444768.1|CD444768
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|149021310|gb|EE045776.2|EE045776
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|71309640|gb|DR791098.1|DR791098
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: ATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTTATCCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAEST: gi|76915901|gb|DV166158.1|DV166158
genomic: ATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACT-ATC-ATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCA
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|148957639|gb|EC903748.2|EC903748
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGAACGCATGAATGACTTGGTGGATATCACTGGCTCACAAATTCAEST: gi|211186203|gb|FL226982.1|FL226982
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTG-ATATCACTGGCTCACAAATTCA
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|76012671|gb|DT939841.1|DT939841
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|76918299|gb|DV167237.1|DV167237
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|88757545|gb|DY541686.1|DY541686
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|89253166|gb|DY624952.1|DY624952
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|71433844|gb|DR814894.1|DR814894
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|71445757|gb|DR826807.1|DR826807
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211188599|gb|FL226988.1|FL226988
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|88757388|gb|DY541529.1|DY541529
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|71450112|gb|DR831162.1|DR831162
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|149109596|gb|EE190280.2|EE190280
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|76019054|gb|DT946224.1|DT946224
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|74244136|gb|DT652050.1|DT652050
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|149072118|gb|EE160356.2|EE160356
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|71310021|gb|DR791299.1|DR791299
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GATGGCGTGACACCTTGGGGTNNNNNNNTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|78079510|gb|DV507922.1|DV507922
genomic: GATGGCGTGACACCTTGGGGTGGGGGG-TTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211305543|gb|FL417489.1|FL417489
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GAGTGGCGTGACACCTTSGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAEST: gi|91875020|gb|EB404977.1|EB404977
genomic: GA-TGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGA
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|149000833|gb|EE038060.2|EE038060
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|71322734|gb|DR798048.1|DR798048
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|148952248|gb|EC898054.2|EC898054
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|93282901|gb|EB675165.1|EB675165
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211186206|gb|FL226985.1|FL226985
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTNGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211186202|gb|FL226981.1|FL226981
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|67019641|gb|CO448390.1|CO448390
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|71774178|gb|DR972058.1|DR972058
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|50329329|gb|CO524455.1|CO524455
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|67019677|gb|CO448426.1|CO448426
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|74239737|gb|DT647651.1|DT647651
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211186201|gb|FL226980.1|FL226980
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|6021103|gb|AW066031.1|AW066031
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAGTTCACEST: gi|76288557|gb|DV028125.1|DV028125
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|76918592|gb|DV167365.1|DV167365
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|78123919|gb|DV542303.1|DV542303
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|78108354|gb|DV526772.1|DV526772
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|78084632|gb|DV513025.1|DV513025
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211186207|gb|FL226986.1|FL226986
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGEST: gi|211186208|gb|FL226987.1|FL226987
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTG
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTEST: gi|89761642|gb|DY689571.1|DY689571
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCT
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|71766165|gb|DR964102.1|DR964102
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACEST: gi|211186205|gb|FL226984.1|FL226984
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCAC
EST: GGATGGCGTGACACCTTGGGGTGGGGG-TTGCAAATCTTTCACTATCATG GTGCCAGGACCGCATGAATGACTTGGTGAT
genomic: GGATGGCGTGACACCTTGGGGTGGGGGGTTGCAAATCTTTCACTATCATGgtaagaattg ... tcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGAT
tgaatgaccttttggaaagggaagtattttttgaccaagaaagtgtcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACGAAGCTGCAAGTTCTATCTCTACGCCAGATCAGGCCTCAGCTAGAAGAC
ttttgac putative branch site (score: 325)
aagtatttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttttgtttacttcagttcctatactagatgaccacatggtctttttgaatgaccttttggaaagggaagtattttttgaccaagaaagtgtcaaattcagGTGCCAGGACCGCATGAATGACTTGGTGATATCACTGGCTCACAAATTCACGAAGCTGCAAGTTCTATCTCTACGCCAGATCAGGCCTCAGCTAGAAGAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
ttttgtt
- - - - - - - - - - - - - - - - cacatgg
- - - - - - - - - - - - - - - - - - - - - - ttgaatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caagaaa