1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ttcgcatttctggaccttgtgtcacagtaatcagttcttaattattcgttgccatgcttctagtttgttgttttgacacatggcatgctttctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACTTTATTGACAAAAATACAGCGCATCGAATGGAACAATAG
species | Zea mays |
transcript | GRMZM2G132084_T03 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTG GCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACTEST: gi|78076717|gb|DV505151.1|DV505151
genomic: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTGgtaggttgat ... tctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACT
EST: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTG GCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACTEST: gi|211506260|gb|FL375259.1|FL375259
genomic: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTGgtaggttgat ... tctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACT
EST: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTG GCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACTEST: gi|38687922|gb|CK144953.1|CK144953
genomic: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTGgtaggttgat ... tctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACT
EST: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAA---G GCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACTEST: gi|101387192|gb|EB815613.1|EB815613
genomic: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTGgtaggttgat ... tctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACT
EST: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTG GCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACT
genomic: TACTCGTTCCGTACACCTCTGTGCTCTTTGGCATTGTCCTCTGCAAGGTGgtaggttgat ... tctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACT
tcgttgccatgcttctagtttgttgttttgacacatggcatgctttctccttcagGCTTATGATTTCACTCGAATACTGAGCTCCTTTTATTTCAAGGGGTATACTTTATTGACAAAAATACAGCGCATCGAATGGAACAATAG
ttttgac putative branch site (score: 10)
catgctttctccttc putative PPT
ttgtttt TA-rich tract