1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaaagtaatgtctgtctgggtgcagtcataacacgcaccatttcatttatgtttttggatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGATGGCCCGGCTGTATAGTGGGAATCTCAGTATGGTTGCGCTCAGAAATG
species | Zea mays |
transcript | GRMZM2G124353_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|67034943|gb|CO463476.1|CO463476
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACTGAAGCGAATGAGTTGGCAATGTTGEST: gi|149042716|gb|EE047231.2|EE047231
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|148965746|gb|EE016621.2|EE016621
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|6626596|gb|AW258128.1|AW258128
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|20811243|gb|BQ295721.1|BQ295721
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGCTGEST: gi|94472312|gb|EB701270.1|EB701270
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|148955020|gb|EC900523.2|EC900523
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|31910697|gb|CD651554.1|CD651554
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|5398767|gb|AI812232.1|AI812232
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|31350579|gb|CD434936.1|CD434936
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|14208236|gb|BG841914.1|BG841914
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGEST: gi|24934326|gb|CA452544.1|CA452544
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACTGAAGCGAATGAGTTGGCAATGTTGEST: gi|148929128|gb|EC874538.2|EC874538
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
EST: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAG GTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
genomic: TTGTAGAGTTTGCAGAGGCACTCACCTCCAAAATGCCTGGCAATCTCAAGgtaaaagtaa ... gatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTG
tgtctgggtgcagtcataacacgcaccatttcatttatgtttttggatcctgcagGTTGCGTATTTTGTGAATTCTGGGACCGAAGCGAATGAGTTGGCAATGTTGATGGCCCGGCTGTATAGTGGGAATCTCAGTATGGTTGCGCTCAGAAATG
tcataac putative branch site (score: 484)
atttcatttatgtttt TA-rich tract