Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taagtttaaatttgcaacccctttcactttgcagttagtctctcttcgtctattgattgtatgccctgttcctattggaaaatttatgcactttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAATCCGAGCAACATCCTATTCTTCTCATGAGATAGATGAGCAAGAAAATGAT

Basic information

species Zea mays
transcript GRMZM2G101571_T02
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G101571_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os02g57510.2 (Oryza sativa), 3'ss of exon 2
-taagtttaaatttgca-acccctttcactttgcagttagtctctcttcgtctattgattgtatgccctgttcctattggaaaatttatgcac-tttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAATCCGAGCAACATCCTATTCTTCTCATGAGATAGATGAGCAAGAAAATGAT
 | | | |  ||||  |        | | ||||||  |    |  | |  | | |  ||  |||||  ||  |    ||   | || ||| |  |||  ||| | | || |||| |||||||||||| || |||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||| | || |||   
ttgaatatttatttatatggtttgcttagtttgcatgtgtctttgcattttatttccatcatatgctttgcgcacgctgattatttcatggaaattttagCAACTACCGCAGCACCAGAACTTCTCTTTTTGATGGCATTGAGGAGGGCAGAATCCGTGCAACATCCTATTCTTCACATGAGATAGATGAGAATGAGAAT---

upper sequence: GRMZM2G101571_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os02g57510.4 (Oryza sativa), 3'ss of exon 2
taagtttaaatttgcaacccctttcactttgcagttagtctctcttcgtctattgattgtatgccctgttcctattggaaaatttatgcac-tttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAATCCGAGCAACATCCTATTCTTCTCATGAGATAGATGAGCAAGAAAATGAT---------
          | |         || | ||||||  |    |  | |  | | |  ||  |||||  ||  |    ||   | || ||| |  |||  ||| | | || |||| |||||||||||| || |||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||| | || ||||||         
---------ttatatggtttgctt-agtttgcatgtgtctttgcattttatttccatcatatgctttgcgcacgctgattatttcatggaaattttagcaactaccgcagCACCAGAACTTCTCTTTTTGATGGCATTGAGGAGGGCAGAATCCGTGCAACATCCTATTCTTCACATGAGATAGATGAGAATGAGAATGATCAAGCTATT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60345631|gb|DN212604.1|DN212604
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|37622088|gb|CF675141.1|CF675141
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|87154400|gb|DY399189.1|DY399189
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|92088107|gb|EB484338.1|EB484338
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216835|gb|FL144756.1|FL144756
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|78021287|gb|DV489674.1|DV489674
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304813|gb|FL144776.1|FL144776
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|87155055|gb|DY399844.1|DY399844
EST:     GCAGGGGGCAGCATTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|32868635|gb|CF008317.1|CF008317
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGATT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|74240317|gb|DT648231.1|DT648231
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216837|gb|FL144758.1|FL144758
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216833|gb|FL144754.1|FL144754
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|28910030|gb|CB331222.1|CB331222
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211306828|gb|FL144778.1|FL144778
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|93281723|gb|EB673987.1|EB673987
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304811|gb|FL144774.1|FL144774
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304800|gb|FL144763.1|FL144763
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTTGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|5871387|gb|AW017858.1|AW017858
EST:     TGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: TGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304807|gb|FL144770.1|FL144770
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|6031335|gb|AW076192.1|AW076192
EST:     TAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: TAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304806|gb|FL144769.1|FL144769
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|26455131|gb|CA826714.1|CA826714
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304808|gb|FL144771.1|FL144771
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|60348036|gb|DN215009.1|DN215009
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|22546781|gb|BU099092.1|BU099092
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|60343725|gb|DN210698.1|DN210698
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304809|gb|FL144772.1|FL144772
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216840|gb|FL144761.1|FL144761
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211306827|gb|FL144777.1|FL144777
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304812|gb|FL144775.1|FL144775
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGATGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304803|gb|FL144766.1|FL144766
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216832|gb|FL144753.1|FL144753
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216839|gb|FL144760.1|FL144760
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211216836|gb|FL144757.1|FL144757
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304801|gb|FL144764.1|FL144764
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|30160483|gb|CB924212.1|CB924212
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
EST: gi|211304805|gb|FL144768.1|FL144768
EST:     GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGG                         CTATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT
genomic: GCAGGGGGCAGCACTAATCGAATCGAGACTAGCGCCATGAACCCGAGAGGgtaagtttct ... ctttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcgtctattgattgtatgccctgttcctattggaaaatttatgcactttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAATCCGAGCAACATCCTATTCTTCTCATGAGATAGATGAGCAAGAAAATGAT
     tattgat  putative branch site (score: 3)
                           tattggaaaatttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taagtttaaatttgcaacccctttcactttgcagttagtctctcttcgtctattgattgtatgccctgttcctattggaaaatttatgcactttgtgcagCCATCGTAGCAACAGAACTTCTCTCTTCGATGGCATTGAGGAGGGTGGAATCCGAGCAACATCCTATTCTTCTCATGAGATAGATGAGCAAGAAAATGAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAA