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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagatgagtttggggatttgctatgaaccttctaattccccttctgtttttttattagttggattggagatggatttgacgctcctgttcctattctgatctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC

Basic information

species Zea mays
transcript GRMZM2G094712_T02
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094712_T04 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 2
gtaagatgagtttggggatttgctatgaaccttctaattccccttctgtttttttattagttggattggagatggatttgacgctcctgttcctattctgatctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC
||||| ||  || ||||| || ||||  |  || |     | | |  || ||||      ||||||||| | ||||||||||  ||   ||  |  |||||||   | |||||||||||||||| |||||||| |||||||||||||| ||||| ||| ||||||| || ||
gtaaggtgttttgggggaatttctattgattttttg----ctccttcgtattttgg---attggattggtggtggatttgac-ttcgattttgtggtctgatcggagtaggaagggaagCCCCTGGTGCTGAATGTGGTCAGGCGCGCTGAGCAGATGCTGATCAACAACCC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32798377|gb|CD950613.1|CD950613
EST:     TGAAGGTCAACCTCGGGGGCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: TGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211351968|gb|FL217074.1|FL217074
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|51592836|gb|CV071982.1|CV071982
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|15323595|gb|BI478852.1|BI478852
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|32798706|gb|CD950942.1|CD950942
EST:     ATCCTAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|47961783|gb|CN844492.1|CN844492
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAGGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211211706|gb|FL374152.1|FL374152
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31357714|gb|CD442071.1|CD442071
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGGGGGTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|51592763|gb|CV071909.1|CV071909
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211266228|gb|FL159045.1|FL159045
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAAT
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAAT
EST: gi|6021419|gb|AW066347.1|AW066347
EST:     AAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGA-                         GAA-GGAAGCCCCTA-TGCTGAACG-GGTCAGGCGCGCCGAGCAAATGTTG
genomic: AAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|18053152|gb|BM318810.1|BM318810
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211014760|gb|FL416055.1|FL416055
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|32808331|gb|CD960565.1|CD960565
EST:     ATCTCAGCCCCGTGATGGTCAACCTCGGGGTCGGCGCCTACCGGGCCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|18385028|gb|BM418227.1|BM418227
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211443956|gb|FL410276.1|FL410276
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|18385008|gb|BM418207.1|BM418207
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211099665|gb|FL378492.1|FL378492
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|51593002|gb|CV072148.1|CV072148
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|62550538|gb|DN830958.1|DN830958
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|58029674|gb|CX725101.1|CX725101
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|20803254|gb|BQ294304.1|BQ294304
EST:     TCCCAGCCCCGTGAAGGTCAACCTCGGGGTCTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGTTCTGGCGCGCTTTGCAAATGTTG
genomic: TCCCAGCCCCGTGAAGGTCAACCTCGGGGTC-GGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|33942552|gb|CF349152.1|CF349152
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCTCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|108953678|gb|EC364837.1|EC364837
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|58029769|gb|CX725196.1|CX725196
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|44681683|gb|CK786731.1|CK786731
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|47962228|gb|CN844937.1|CN844937
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|67024299|gb|CO453048.1|CO453048
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211144698|gb|FL413095.1|FL413095
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|47961407|gb|CN844116.1|CN844116
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|108954266|gb|EC365083.1|EC365083
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAGGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|94476203|gb|EB705161.1|EB705161
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|32803624|gb|CD955860.1|CD955860
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|15188202|gb|BI417179.1|BI417179
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31353308|gb|CD437665.1|CD437665
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|149014131|gb|EE043672.2|EE043672
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|108953108|gb|EC364589.1|EC364589
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|62550494|gb|DN830914.1|DN830914
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|6020876|gb|AW065804.1|AW065804
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211323634|gb|FL399609.1|FL399609
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|47961406|gb|CN844115.1|CN844115
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|109637234|gb|EC590779.1|EC590779
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31356983|gb|CD441340.1|CD441340
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|62550589|gb|DN831009.1|DN831009
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211041751|gb|FL371252.1|FL371252
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211199749|gb|FL411771.1|FL411771
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211432198|gb|FL427261.1|FL427261
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211493670|gb|FL398960.1|FL398960
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|33100620|gb|CF060580.1|CF060580
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|26456907|gb|CA828490.1|CA828490
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|45213782|gb|CK850009.1|CK850009
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|20507973|gb|BQ279845.1|BQ279845
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGTAGCAAATGTT
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCG-AGCAAATGTT
EST: gi|47961457|gb|CN844166.1|CN844166
EST:     ATCCCAGCCCCGTGAAGATCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|38502508|gb|CF972368.1|CF972368
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211504654|gb|FL412020.1|FL412020
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211449902|gb|FL391246.1|FL391246
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|18383833|gb|BM417033.1|BM417033
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|44682191|gb|CK787239.1|CK787239
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGACCGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|15323594|gb|BI478851.1|BI478851
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211535952|gb|FL381085.1|FL381085
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|148986993|gb|EE030811.2|EE030811
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31250263|gb|CD219287.1|CD219287
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211296653|gb|FL387902.1|FL387902
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|213184108|gb|FM191702.1|FM191702
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|149108013|gb|EE292368.2|EE292368
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31361794|gb|CD446151.1|CD446151
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211313595|gb|FL415828.1|FL415828
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|9731418|gb|BE510170.1|BE510170
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGTTTCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|111433992|gb|EE298061.1|EE298061
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|111145728|gb|EE258080.1|EE258080
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211289848|gb|FL370551.1|FL370551
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31351488|gb|CD435845.1|CD435845
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|16137336|gb|BI894201.1|BI894201
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211029227|gb|FL368599.1|FL368599
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|148940851|gb|EC885683.2|EC885683
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|61119383|gb|DN560344.1|DN560344
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|148941397|gb|EC886314.2|EC886314
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|32798269|gb|CD950505.1|CD950505
EST:     CCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: CCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211493669|gb|FL398959.1|FL398959
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31358307|gb|CD442664.1|CD442664
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211039937|gb|FL415152.1|FL415152
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|31250213|gb|CD219237.1|CD219237
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|9255298|gb|BE345766.1|BE345766
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCTTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211130248|gb|FL407379.1|FL407379
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|47961719|gb|CN844428.1|CN844428
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|29130123|gb|CB380827.1|CB380827
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|108823876|gb|EC277884.1|EC277884
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|9255430|gb|BE345898.1|BE345898
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGTAATCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211159439|gb|FL370490.1|FL370490
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|9461770|gb|BE453896.1|BE453896
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGTTAATTCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|62525922|gb|DN828570.1|DN828570
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|32798421|gb|CD950657.1|CD950657
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|149065671|gb|EE286793.2|EE286793
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|16137337|gb|BI894202.1|BI894202
EST:     ATCCCAGCCCCATGAAGGTCAACCTCGGGGTTGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGA
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGA
EST: gi|9794571|gb|BE552879.1|BE552879
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGTTCTCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTT
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAG-CCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTT
EST: gi|109637534|gb|EC591079.1|EC591079
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211060007|gb|FL387699.1|FL387699
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|51592747|gb|CV071893.1|CV071893
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211363355|gb|FL393791.1|FL393791
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|60672637|gb|DN475335.1|DN475335
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|40485897|gb|CK394794.1|CK394794
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211266269|gb|FL388730.1|FL388730
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
EST: gi|211245085|gb|FL389172.1|FL389172
EST:     ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG                         GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG
genomic: ATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 277

GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 598

GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 349

GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 596

GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAGgtaagatgag ... atctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attagttggattggagatggatttgacgctcctgttcctattctgatctctgcagGAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC
                                        ttctgat  putative branch site (score: 596)
                                              tctctgc  CT-rich tract