Sequence
atgc intronic sequence ATGC exonic sequence...tgccgatgtgttgcttgttaagatgtctgctctatgatacaattcattatattagagtggtaaatgataagcaattcctttttgtgttttttttctgcagCATCTTGTCTGAAATCGTCTAGACCAAACACCATAGTTCTATCTGGGCTTAGTGGCAGTGGCAAAACCACTATTTACTACCAG
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G091503_T04 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os08g41250.2 (Oryza sativa), 3'ss of exon 1
tgccgatgtgttgcttgttaagatgtc----tgctctatgatacaattcattatattagagtggtaaatgataagcaattcctt-tttgtgttttttttctgcagCATCTTGTCTGAAATCGTCTAGACCAAACACCATAGTTCTATCTGGGCTTAGTGGCAGTGGCAAAACCACTATTTACTACCAG
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--aaaaagtggaacttctaaagtagtcattttgctacattattttgatggagctgcatgtgcagtaattaatatgcaattcctggcttctgttttatttc---agTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211515518|gb|FL138434.1|FL138434EST: CTATGTAGCGGCCGCGGTGGTTGCCGTCACAATCCTGTTGCTTATCGTWG CATCTTGTCTGAAATCGTCTTGACCAAACACCATAGTTCTATCTGGGCTTA
genomic: CTATGTAGCGGCCGCGGTGGTTGCCGTCACAATCCTGTTGCTTATCGTAGgtgcggtgcg ... ttttctgcagCATCTTGTCTGAAATCGTCTAGACCAAACACCATAGTTCTATCTGGGCTTA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.attatattagagtggtaaatgataagcaattcctttttgtgttttttttctgcagCATCTTGTCTGAAATCGTCTAGACCAAACACCATAGTTCTATCTGGGCTTAGTGGCAGTGGCAAAACCACTATTTACTACCAG
ttcctttttgtgtttt CT-rich tract
tttttgtgtttttttt TA-rich tract