1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaagcatgttatgtgttgtgaataaatactttcacttcgatttctgagggtactaactgcacagagcttttgttttttgtgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAACGTGTTATTATACTTCAGTTTATGATGCTCTACAAAGTTCAAAG
species | Zea mays |
transcript | GRMZM2G082214_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAEST: gi|211366679|gb|FK959524.1|FK959524
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGC-AGATGGACEST: gi|32849363|gb|CD989044.1|CD989044
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGAC
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAEST: gi|32935051|gb|CF039863.1|CF039863
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGEST: gi|211366680|gb|FK959525.1|FK959525
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGG
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACNAG-AGCAGAEST: gi|78027709|gb|DV496096.1|DV496096
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATAC-AGGAGCAGA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAEST: gi|148987058|gb|EE030883.2|EE030883
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAEST: gi|20811241|gb|BQ295719.1|BQ295719
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAEST: gi|61118955|gb|DN559916.1|DN559916
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACCCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAEST: gi|26457028|gb|CA828611.1|CA828611
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGEST: gi|211366681|gb|FK959526.1|FK959526
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGG
EST: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAEST: gi|60349630|gb|DN216603.1|DN216603
genomic: TGAACTTCATTAATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
EST: ATGTGCATGACATTTTCCTAGACTGTGACCATGACTCT ATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
genomic: ATGTGCATGACATTTTCCTAGACTGTGACCATGACTCTgtaagcatgt ... tgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAA
cttcgatttctgagggtactaactgcacagagcttttgttttttgtgcaacttagATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAGGAGCAGAAACGTGTTATTATACTTCAGTTTATGATGCTCTACAAAGTTCAAAG
tactaac putative branch site (score: 53)
cttttgttttttgt putative PPT
ttttgtttttt TA-rich tract