1 5' 3' | 2 5' 3' | 3 5' 3' |
gtacgtgtcttcgtttgtattagggattttcctgattgatggctgatcttaccttgtgttcttgtctgatgatattctgttgttgtggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCTAAGGAGGTCGGATGGAACTACCATGACACCATCAGG
species | Zea mays |
transcript | GRMZM2G072315_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCEST: gi|37387327|gb|CF630856.1|CF630856
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|211068821|gb|FK951863.1|FK951863
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTEST: gi|20336963|gb|BQ172593.1|BQ172593
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCT
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|7162350|gb|AW519972.1|AW519972
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|15427295|gb|BI543117.1|BI543117
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|7162634|gb|AW520256.1|AW520256
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|211071555|gb|FK951876.1|FK951876
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAACTTTCEST: gi|18180385|gb|BM381595.1|BM381595
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211066077|gb|FK951849.1|FK951849
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGEST: gi|211068815|gb|FK951857.1|FK951857
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAG
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCCGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|24768412|gb|CA403541.1|CA403541
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|19770488|gb|BQ035209.1|BQ035209
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACTAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|74246018|gb|DT653932.1|DT653932
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|9566387|gb|BE475896.1|BE475896
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGGCCTGAGGCTGCAACCTGGACACAAGTACEST: gi|89252055|gb|DY623841.1|DY623841
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTAC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAAC-TGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|89761984|gb|DY689785.1|DY689785
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|60351123|gb|DN218096.1|DN218096
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|148931533|gb|EC874588.2|EC874588
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|28983628|gb|BQ538749.2|BQ538749
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211074298|gb|FK951895.1|FK951895
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|91049188|gb|EB159606.1|EB159606
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAAC-TGGACACAAGTACTGCCTCCTTGGTGAGCTTTTEST: gi|76014492|gb|DT941662.1|DT941662
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211077040|gb|FK951908.1|FK951908
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211068822|gb|FK951864.1|FK951864
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGNACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|18179456|gb|BM380666.1|BM380666
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|7227548|gb|AW566189.1|AW566189
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|5018390|gb|AI714583.1|AI714583
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|60340934|gb|DN207907.1|DN207907
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|89249167|gb|DY620953.1|DY620953
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCCCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|22542946|gb|BU093384.1|BU093384
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|15082732|gb|BI389416.1|BI389416
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211077036|gb|FK951904.1|FK951904
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|89761874|gb|DY689713.1|DY689713
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|16925939|gb|BM079007.1|BM079007
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|71427272|gb|DR808322.1|DR808322
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCCCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTTTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTTEST: gi|211071560|gb|FK951881.1|FK951881
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTEST: gi|213179419|gb|FM183147.1|FM183147
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCT
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|211077038|gb|FK951906.1|FK951906
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GATCCTGAGGCTGCAACCTGGACACAAGTACTEST: gi|21390089|gb|BQ528138.1|BQ528138
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACT
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|74241755|gb|DT649669.1|DT649669
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|9731552|gb|BE510304.1|BE510304
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTEST: gi|211066076|gb|FK951848.1|FK951848
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACT
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACEST: gi|148943616|gb|EC888679.2|EC888679
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAAC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|22542431|gb|BU092869.1|BU092869
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTTEST: gi|4835156|gb|AI670382.1|AI670382
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|18180509|gb|BM381719.1|BM381719
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: GACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|14529422|gb|BI096555.1|BI096555
genomic: GACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|89759041|gb|DY687990.1|DY687990
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCTCCTGGTCATCCCTGACGCTCTTAA AGTCCTGAGGCTGCEST: gi|148943617|gb|EC888680.2|EC888680
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|9461296|gb|BE453662.1|BE453662
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTTEST: gi|211313741|gb|FL422329.1|FL422329
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211068817|gb|FK951859.1|FK951859
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|14364820|gb|BG946631.1|BG946631
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGTACGACAAGACCAAGGCGGCCTGGTCATGCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|78027277|gb|DV495664.1|DV495664
genomic: CCGCCGTACGACAAGACCAA-GC-GCCTGGTCAT-CCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|9731083|gb|BE509835.1|BE509835
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCCTGGTGAGCCTTCEST: gi|211074303|gb|FK951900.1|FK951900
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|31353275|gb|CD437632.1|CD437632
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|149020931|gb|EE045767.2|EE045767
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|18385232|gb|BM418431.1|BM418431
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACTAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCAGGACACAAGTACTGCCTCCTTGGGGAGCTTTCEST: gi|21391120|gb|BQ529169.1|BQ529169
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211071564|gb|FK951885.1|FK951885
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTTCTGAGGCTGCAACCEST: gi|5108459|gb|AI740172.1|AI740172
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|71443776|gb|DR824826.1|DR824826
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|22543243|gb|BU093681.1|BU093681
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|20802945|gb|BQ293995.1|BQ293995
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211323996|gb|FL416228.1|FL416228
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211518734|gb|FK951841.1|FK951841
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTEST: gi|16918423|gb|BM073738.1|BM073738
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTT
EST: CCCCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTTTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTTEST: gi|211074290|gb|FK951887.1|FK951887
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|15427079|gb|BI542901.1|BI542901
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|91872964|gb|EB402921.1|EB402921
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|21331365|gb|BQ486746.1|BQ486746
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|22542317|gb|BU092755.1|BU092755
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCEST: gi|211075474|gb|FL339570.1|FL339570
genomic: CCGCCGCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
EST: GCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAA GGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
genomic: GCCGTACGACAAGACCAAGCGCCTGGTCATCCCTGACGCTCTTAAgtacgtgtct ... tggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTC
ggctgatcttaccttgtgttcttgtctgatgatattctgttgttgtggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCTAAGGAGGTCGGATGGAACTACCATGACACCATCAGG
atgatatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacgtgtcttcgtttgtattagggattttcctgattgatggctgatcttaccttgtgttcttgtctgatgatattctgttgttgtggtccgtagGGTCCTGAGGCTGCAACCTGGACACAAGTACTGCCTCCTTGGTGAGCTTTCTAAGGAGGTCGGATGGAACTACCATGACACCATCAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA