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gtatgtaatttgacctgtttttgcatgtagattgacagtactactggagtagcttttattacatacataatacatacccctcttgttatcgtttttacacaaaaaaactgatacattcgtatggatgtatctctacttctgattgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTATCCTCAAAGATAGTAGCGTCTGAGTACCTAGAGTCAAATAAAGATCTCT
species | Zea mays |
transcript | GRMZM2G066051_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|148999214|gb|EE036133.2|EE036133
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|78107219|gb|DV525637.1|DV525637
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|149072876|gb|EE161132.2|EE161132
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|7844268|gb|AW787490.1|AW787490
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|6194845|gb|AW146949.1|AW146949
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|211268420|gb|FL369229.1|FL369229
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|71447694|gb|DR828744.1|DR828744
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|148955827|gb|EC901514.2|EC901514
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|71328881|gb|DR801123.1|DR801123
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|31354689|gb|CD439046.1|CD439046
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|60340162|gb|DN207135.1|DN207135
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|32856027|gb|CD995708.1|CD995708
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTCGCAAACTTGCAAAGACAGCAAGTAEST: gi|149082296|gb|EE171481.2|EE171481
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|6994177|gb|AW453391.1|AW453391
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|7844267|gb|AW787489.1|AW787489
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGTTTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTEST: gi|6022524|gb|AW067557.1|AW067557
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATG-CTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGT
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|6194848|gb|AW146952.1|AW146952
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|149079796|gb|EE168794.2|EE168794
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTAEST: gi|149013854|gb|EE043335.2|EE043335
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
EST: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAG ACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
genomic: AGAACACTTTACGGCTATTAATCATACATCTTCCAAAACTAAATTTGGAGgtatgtaatt ... attgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTA
acacaaaaaaactgatacattcgtatggatgtatctctacttctgattgttgcagACTAGGAAAGATGCTACTCAAGTTGTTGCAAACTTGCAAAGACAGCAAGTATCCTCAAAGATAGTAGCGTCTGAGTACCTAGAGTCAAATAAAGATCTCT
ttctgat putative branch site (score: 303)
aaaaaact TA-rich tract