1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtacacctattttctctgtctcgttcgtttgtgttaccccttctggataagattctgattggtatgtacaatcagtaacaatatgtatctccttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
species | Zea mays |
transcript | GRMZM2G062076_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60348926|gb|DN215899.1|DN215899
genomic: ACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|22542576|gb|BU093014.1|BU093014
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: GTAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|9731495|gb|BE510247.1|BE510247
genomic: G-AGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211094642|gb|FL030914.1|FL030914
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|149074288|gb|EE162665.2|EE162665
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|14203855|gb|BG837532.1|BG837532
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|4646735|gb|AI621810.1|AI621810
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: AAGGAT-AGTCCTATGCCG AAGAAAGAGACCGG-GGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211079010|gb|FL148949.1|FL148949
genomic: AAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|28987594|gb|CB351712.1|CB351712
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|27522103|gb|CA989209.1|CA989209
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|19770098|gb|BQ034819.1|BQ034819
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|22546523|gb|BU098834.1|BU098834
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60357589|gb|DN224562.1|DN224562
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211094641|gb|FL030913.1|FL030913
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|71318075|gb|DR795799.1|DR795799
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211094644|gb|FL030916.1|FL030916
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|94479969|gb|EB708927.1|EB708927
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60357962|gb|DN224935.1|DN224935
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|44901479|gb|CK828024.1|CK828024
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: GAGGAACGTGAGCGCAAGCACTACTC-TCCNAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211079009|gb|FL148948.1|FL148948
genomic: GAGGAACGTGAGCGCAAGCACTACTCTTCC-AAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAASSACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|37391486|gb|CF632986.1|CF632986
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|67015842|gb|CO444591.1|CO444591
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211079019|gb|FL148958.1|FL148958
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|40334927|gb|CK368997.1|CK368997
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|71318073|gb|DR795798.1|DR795798
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: CAAGGATAAGTCTTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|28910213|gb|CB331325.1|CB331325
genomic: CAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60395043|gb|DN227912.1|DN227912
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: CCAAGGATAAGTCTTATGCGG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTATTTTTAGAAGEST: gi|211540431|gb|FL210072.1|FL210072
genomic: CCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAA-SACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60346299|gb|DN213272.1|DN213272
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60397411|gb|DN230227.1|DN230227
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: ACGTGAGCGC-AGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60352503|gb|DN219476.1|DN219476
genomic: ACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: CCAAGGATAAGTCTTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|19822434|gb|BQ048458.1|BQ048458
genomic: CCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211079007|gb|FL148946.1|FL148946
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAASCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|19770347|gb|BQ035068.1|BQ035068
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|8367292|gb|BE050237.1|BE050237
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTGCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|37393026|gb|CF633769.1|CF633769
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|28568978|gb|CB280853.1|CB280853
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGGTAAGTCCTATGTCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|22520729|gb|BU079540.1|BU079540
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|9794824|gb|BE553132.1|BE553132
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|21891526|gb|BQ744739.1|BQ744739
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|9742832|gb|BE518980.1|BE518980
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|22521454|gb|BU080265.1|BU080265
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|148958811|gb|EE010417.2|EE010417
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|40334706|gb|CK368776.1|CK368776
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|28569026|gb|CB280901.1|CB280901
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211540429|gb|FL210070.1|FL210070
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211540435|gb|FL210076.1|FL210076
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|6536578|gb|AW224891.1|AW224891
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60344935|gb|DN211908.1|DN211908
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: ACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211081741|gb|FL148961.1|FL148961
genomic: ACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211079013|gb|FL148952.1|FL148952
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGGTTCAAEST: gi|211079006|gb|FL148945.1|FL148945
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGGTTCAA
EST: TGAGGAACGTGAGCGCAA-CACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211540434|gb|FL210075.1|FL210075
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|148965262|gb|EC906100.2|EC906100
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|24764934|gb|CA400095.1|CA400095
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211076273|gb|FL148942.1|FL148942
genomic: TCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAACTCTAGCCWTCTACTCTTAGAAGEST: gi|211079014|gb|FL148953.1|FL148953
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGGGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211276946|gb|FL388217.1|FL388217
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211076275|gb|FL148944.1|FL148944
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|26457681|gb|CA829264.1|CA829264
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211514736|gb|FL212670.1|FL212670
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|76015323|gb|DT942493.1|DT942493
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|9794685|gb|BE552993.1|BE552993
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60394367|gb|DN227237.1|DN227237
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: GGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|60349874|gb|DN216847.1|DN216847
genomic: GGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAGEST: gi|211453654|gb|FL478351.1|FL478351
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
EST: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCG AAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
genomic: TGAGGAACGTGAGCGCAAGCACTACTCTTCCAAGGATAAGTCCTATGCCGgtacacctat ... ttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
taagattctgattggtatgtacaatcagtaacaatatgtatctccttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
cagtaac putative branch site (score: 2)
tctccttgcct putative PPT
taacaatat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacacctattttctctgtctcgttcgtttgtgttaccccttctggataagattctgattggtatgtacaatcagtaacaatatgtatctccttgcctgcagAAGAAAGAGACCGGCGGAAAAGCTCTAGCCATCTACTCTTAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA