Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ccaaaatcatttttgatttatttattgctatcttgtatttgattcatcaatttatgtctaggtaagcaaaagctcttactctgaaattttcaactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT

Basic information

species Zea mays
transcript GRMZM2G057853_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G057853_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os01g43250.1 (Oryza sativa), 3'ss of exon 2
-----ccaaaatcatttttgatttatttattgctatcttgtatttgattcatcaatttatgtctaggtaagcaaaagctcttactctgaaattttcaactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT
      || ||        | |||||||  |||| |  || |||    |  | | ||| | | || | ||     ||   | |  || ||||||||   |||||||||||||||||||||||||||| || |||||| | || |||  |||||| ||||| |||||| | ||||| ||||||||||| |||   | ||| |||||
ttctttcagaaaagaaaacgttttatttcatgctgtactgcattc--cttgttattttctttatatggaaatggcag---tcaaactcaaattttcctttgacagATGATCAACTTCCAACCTGGAGGAAATGTAAAGTATTTGAGAGTGGCAATTCTCACATACTACACGTACAGTTTGGATTACAACTGTCTAGTCTAAAAAT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211528448|gb|FL327575.1|FL327575
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211094476|gb|FL367309.1|FL367309
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|148953595|gb|EC898949.2|EC898949
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211023880|gb|FL345724.1|FL345724
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211131766|gb|FL358659.1|FL358659
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|148930898|gb|EC873352.2|EC873352
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211391014|gb|FL322565.1|FL322565
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71773953|gb|DR971841.1|DR971841
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211220147|gb|FL315336.1|FL315336
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211190593|gb|FL324677.1|FL324677
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|93012339|gb|EB637859.1|EB637859
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211503360|gb|FL354370.1|FL354370
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTKCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211522295|gb|FL320503.1|FL320503
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211453270|gb|FL341703.1|FL341703
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211120948|gb|FL412614.1|FL412614
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211528195|gb|FL317025.1|FL317025
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211219543|gb|FL398658.1|FL398658
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71435208|gb|DR816258.1|DR816258
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|76294071|gb|DV033639.1|DV033639
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|93284260|gb|EB676524.1|EB676524
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211144838|gb|FL418214.1|FL418214
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211260370|gb|FL340609.1|FL340609
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|78080510|gb|DV508922.1|DV508922
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211400243|gb|FL372546.1|FL372546
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211081650|gb|FL369926.1|FL369926
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211367713|gb|FL344720.1|FL344720
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211281506|gb|FL337113.1|FL337113
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTNTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211541357|gb|FL357728.1|FL357728
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|50328005|gb|CO523131.1|CO523131
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211530008|gb|FL385889.1|FL385889
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211270383|gb|FL351867.1|FL351867
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211449141|gb|FL349636.1|FL349636
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|78124130|gb|DV542514.1|DV542514
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211428743|gb|FL388354.1|FL388354
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211304539|gb|FL359139.1|FL359139
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211067531|gb|FL351655.1|FL351655
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|76909537|gb|DV163411.1|DV163411
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211136424|gb|FL362108.1|FL362108
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71772782|gb|DR970707.1|DR970707
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|89252106|gb|DY623892.1|DY623892
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71444110|gb|DR825160.1|DR825160
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211174980|gb|FL426218.1|FL426218
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211112341|gb|FL330334.1|FL330334
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211332970|gb|FL315997.1|FL315997
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211287063|gb|FL337505.1|FL337505
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211359842|gb|FL346888.1|FL346888
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211442017|gb|FL419343.1|FL419343
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211492174|gb|FL337344.1|FL337344
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211447578|gb|FL381418.1|FL381418
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211445204|gb|FL371169.1|FL371169
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211217731|gb|FL411404.1|FL411404
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211471788|gb|FL411612.1|FL411612
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211314737|gb|FL360956.1|FL360956
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211216377|gb|FL354229.1|FL354229
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211541447|gb|FL362041.1|FL362041
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|89248079|gb|DY619865.1|DY619865
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211270380|gb|FL351864.1|FL351864
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211495898|gb|FL369809.1|FL369809
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211093131|gb|FL308875.1|FL308875
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|149107564|gb|EE189447.2|EE189447
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|148981980|gb|EE028040.2|EE028040
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211345408|gb|FL361388.1|FL361388
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211542542|gb|FL409070.1|FL409070
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211080961|gb|FL340062.1|FL340062
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211223755|gb|FL402213.1|FL402213
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211494998|gb|FL334550.1|FL334550
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211080710|gb|FL326336.1|FL326336
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211213572|gb|FL344284.1|FL344284
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71439594|gb|DR820644.1|DR820644
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211089234|gb|FL353067.1|FL353067
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGGAGAA-TTGTAAAATCTTCGAGGATGGCAAC
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGG-AGAAATTGTAAAATCTTCGAGGATGGCAAC
EST: gi|211425297|gb|FL350056.1|FL350056
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211085856|gb|FL313547.1|FL313547
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211516770|gb|FL314348.1|FL314348
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTTGTAAAATCTTCGAGGATGGCAAC
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATT-GTAAAATCTTCGAGGATGGCAAC
EST: gi|211211312|gb|FL358293.1|FL358293
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211095733|gb|FL312077.1|FL312077
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTTAAATCTTCGA
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGA
EST: gi|211457947|gb|FL348753.1|FL348753
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211056828|gb|FL382505.1|FL382505
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211224412|gb|FL320291.1|FL320291
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|76937482|gb|DV175165.1|DV175165
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211046369|gb|FL322285.1|FL322285
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71444109|gb|DR825159.1|DR825159
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCTAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|149074196|gb|EE162559.2|EE162559
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|76286893|gb|DV026461.1|DV026461
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211127312|gb|FL389010.1|FL389010
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211040997|gb|FL343134.1|FL343134
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGCTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211040958|gb|FL341734.1|FL341734
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211111271|gb|FL307961.1|FL307961
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211021367|gb|FL343614.1|FL343614
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211333713|gb|FL357946.1|FL357946
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211305785|gb|FL318621.1|FL318621
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211158079|gb|FL391002.1|FL391002
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211176635|gb|FL423180.1|FL423180
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211457939|gb|FL348745.1|FL348745
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211255182|gb|FL327776.1|FL327776
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|50331370|gb|CO526496.1|CO526496
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|71429468|gb|DR810518.1|DR810518
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|91051936|gb|EB162354.1|EB162354
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
EST: gi|211503960|gb|FL378774.1|FL378774
EST:     TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTG                         ATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT
genomic: TTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 255

GCCATTGTGAATGTCGTCTGGCTTCCTCCAGAGTATGGGGATGCTATAGCTTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT


Block sizes: 46 (upstream exon), 49 (downstream exon)
Score: 149

GCCATTGTGAATGTCGTCTGGCTTCCTCCAGAGTATGGGGATGCTATAGCTTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 156

GCCATTGTGAATGTCGTCTGGCTTCCTCCAGAGTATGGGGATGCTATAGCTTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 75

GCCATTGTGAATGTCGTCTGGCTTCCTCCAGAGTATGGGGATGCTATAGCTTGTGTTTGTGCTGATGGGACACTGTCTTTGTGGGAGGAGGTTGCTGCTGgtcagttatt ... caactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atcaatttatgtctaggtaagcaaaagctcttactctgaaattttcaactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT
                           ctcttac  putative branch site (score: 75)
                                         ttttc  putative PPT
                                      aaattttcaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ccaaaatcatttttgatttatttattgctatcttgtatttgattcatcaatttatgtctaggtaagcaaaagctcttactctgaaattttcaactgacagATGATCAACTTCCAACCTGGAGAAATTGTAAAATCTTCGAGGATGGCAACTCTCATATACTAAATGTACATTTTGGATTACATCTGGGAATTCTGAAAAT

-caaaatca
- - - - - - - - - - - tattgct
- - - - - - - - - - - - - - - -cttgtat
- - - - - - - - - - - - - - - - - - - -tgattca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagcaaa