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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacatttaccatacttgtttaaacctttgccctctgcatggttaattatgttgtgttaatattgagtttctgttcttgcagCTCGGCCACGAACAGGATCATCACTGCCAAGGTCATGCCTCTGTCCAGATCAACATTGGCCACTTGGATGCGAATGGCATGTACGATGTCACTTCACCAC

Basic information

species Zea mays
transcript GRMZM2G056828_T01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgccctctgcatggttaattatgttgtgttaatattgagtttctgttcttgcagCTCGGCCACGAACAGGATCATCACTGCCAAGGTCATGCCTCTGTCCAGATCAACATTGGCCACTTGGATGCGAATGGCATGTACGATGTCACTTCACCAC
                           tgttaat  putative branch site (score: 3)
                                        tttctgttctt  putative PPT
               ttaattatgttgtgtt  TA-rich tract