Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gacacttgaaatctttgactgatgaagctgtactttcctacatttcttttgcttatttcagtttatgtcgagttgtattaatctcttttcttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA

Basic information

species Zea mays
transcript GRMZM2G056501_T05
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G056501_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os09g12570.1 (Oryza sativa), 3'ss of exon 2
gacacttgaaatctttgactgat-gaagctgtactttcctacatttcttttgcttatttcagtttatgtcgagttgtattaa-tctct-tttcttacttga------agACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA
          || |||||| | | ||   |  || |  || |  || |  ||||||| | |  |  | |  | || || ||| | ||| |||||| ||  |      |||  |||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| || || |||||||||||||| ||  |  
---------catgtttgacagtttgagagtccacctagctcctcttgtactgcttatataaaatattattaacttttactaagtgtctgtttcttcctcaatctggcagAGTGTCCATGAAGGTCGCATCTACCAGCTGAAGCTGTTCTGTGACAAGGACTACCCAGAGAAGCCACCATCTGTCCGGTTTCATTCAAGAATCAATATGT

upper sequence: GRMZM2G056501_T02 (Zea mays), 3'ss of exon 2
lower sequence: PP1S490_20V6.1 (Physcomitrella patens), 3'ss of exon 3
-gacacttgaaatctttgactgatgaagctgtactttcctacatttctt---ttgcttatttcagtttatgtcgagttgtattaatctcttttcttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA
  ||   ||| |      | |        | |  ||||  ||  |   |   |||  |   | ||||     |||    | | || ||||| | |    |  || | || ||||| ||||| ||||||    ||||  |||||||||||||||||||||| || ||||||||| | ||| |||| |||||  | || ||| | |
ttacttgtgataaaccccatttcattgtttttgatttcgcactctgtctaagttgtgttactgagttgtcaccgacacat-tcaagctcttgtttg---tacagTCAGTTCATGAAGGTCGTATCTACACATTGAAACTGTTCTGCGACAAGGACTACCCCGATAAGCCACCAACTGTTAGATTCCATTCTCGGATCAACATGA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211187855|gb|FL425725.1|FL425725
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGNCCTCATAAT                         ACCGTCCATGAGGGNCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32804748|gb|CD956984.1|CD956984
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|38229714|gb|CF920027.1|CF920027
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|31628008|gb|CD526398.1|CD526398
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60398352|gb|DN231168.1|DN231168
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|6194997|gb|AW147101.1|AW147101
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|38229677|gb|CF919990.1|CF919990
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211395942|gb|FL420254.1|FL420254
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211219245|gb|FL377237.1|FL377237
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32866733|gb|CF006415.1|CF006415
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|47962651|gb|CN845360.1|CN845360
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211138395|gb|FL369559.1|FL369559
EST:     ATGACATCTACATGCGATCATGGACTGGCCCTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTA
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTA
EST: gi|32866844|gb|CF006526.1|CF006526
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32915000|gb|CF019812.1|CF019812
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32859312|gb|CD998993.1|CD998993
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|50335604|gb|CO530730.1|CO530730
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211476807|gb|FL410821.1|FL410821
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211189279|gb|FL377638.1|FL377638
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|37384211|gb|CF629163.1|CF629163
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32805002|gb|CD957238.1|CD957238
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|40485676|gb|CK394684.1|CK394684
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32860146|gb|CD999827.1|CD999827
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|24767879|gb|CA403014.1|CA403014
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60340923|gb|DN207896.1|DN207896
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|42491923|gb|CK700969.1|CK700969
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|67013798|gb|CO442547.1|CO442547
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32914979|gb|CF019791.1|CF019791
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCAAGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|9732087|gb|BE510839.1|BE510839
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|9733129|gb|BE511881.1|BE511881
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60344371|gb|DN211344.1|DN211344
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211408721|gb|FL421599.1|FL421599
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|18163692|gb|BM333531.1|BM333531
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32801211|gb|CD953447.1|CD953447
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATGAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60354070|gb|DN221043.1|DN221043
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|74035131|gb|DT535621.1|DT535621
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211211952|gb|FL383449.1|FL383449
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|45568582|gb|CK986134.1|CK986134
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|47961820|gb|CN844529.1|CN844529
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211537034|gb|FL424346.1|FL424346
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60347639|gb|DN214612.1|DN214612
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211418179|gb|FL375689.1|FL375689
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60345663|gb|DN212636.1|DN212636
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60358001|gb|DN224974.1|DN224974
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|47961644|gb|CN844353.1|CN844353
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|33770654|gb|CF272948.1|CF272948
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|93014293|gb|EB639813.1|EB639813
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|16925862|gb|BM078930.1|BM078930
EST:     ATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211360583|gb|FL386218.1|FL386218
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|61236918|gb|DN586623.1|DN586623
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|71773637|gb|DR971535.1|DR971535
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|29130750|gb|CB381454.1|CB381454
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211070987|gb|FL387287.1|FL387287
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211456445|gb|FL398519.1|FL398519
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211466212|gb|FL385424.1|FL385424
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32907866|gb|CF012679.1|CF012679
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|84980080|gb|DW530429.1|DW530429
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|148937458|gb|EC881639.2|EC881639
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60672694|gb|DN475388.1|DN475388
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32936724|gb|CF041543.1|CF041543
EST:     ATGGCATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211218096|gb|FL428016.1|FL428016
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|33285502|gb|CF075297.1|CF075297
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211434280|gb|FL405881.1|FL405881
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|37361201|gb|CF602490.1|CF602490
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32866845|gb|CF006527.1|CF006527
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32937562|gb|CF042381.1|CF042381
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32804704|gb|CD956940.1|CD956940
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32804530|gb|CD956766.1|CD956766
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211074029|gb|FL399400.1|FL399400
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|30591607|gb|CD052457.1|CD052457
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|113704186|gb|EE681690.1|EE681690
EST:     ATGACATCTACATGCGATCATGGACTGGCATTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|30591554|gb|CD052432.1|CD052432
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|67029235|gb|CO457984.1|CO457984
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|84981004|gb|DW531353.1|DW531353
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211339579|gb|FL426271.1|FL426271
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32863217|gb|CF002899.1|CF002899
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32916382|gb|CF021194.1|CF021194
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|47962719|gb|CN845428.1|CN845428
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211439206|gb|FL392589.1|FL392589
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32860147|gb|CD999828.1|CD999828
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32856101|gb|CD995782.1|CD995782
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60355402|gb|DN222375.1|DN222375
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211277146|gb|FL403157.1|FL403157
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211112912|gb|FL388652.1|FL388652
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|71773638|gb|DR971536.1|DR971536
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32866732|gb|CF006414.1|CF006414
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211289852|gb|FL370555.1|FL370555
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211400406|gb|FL382673.1|FL382673
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211024530|gb|FL377475.1|FL377475
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|18180144|gb|BM381354.1|BM381354
EST:     ATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211150342|gb|FL403093.1|FL403093
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211366080|gb|FL397075.1|FL397075
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32863816|gb|CF003498.1|CF003498
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32914840|gb|CF019652.1|CF019652
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32858315|gb|CD997996.1|CD997996
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGTGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|16927227|gb|BM080296.1|BM080296
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211458634|gb|FL385378.1|FL385378
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|86856119|gb|DY307130.1|DY307130
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211156234|gb|FL370458.1|FL370458
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32837666|gb|CD977344.1|CD977344
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|60355833|gb|DN222806.1|DN222806
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|211323233|gb|FL374208.1|FL374208
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32913623|gb|CF018435.1|CF018435
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|30591510|gb|CD052409.1|CD052409
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32916451|gb|CF021263.1|CF021263
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|31349736|gb|CD434093.1|CD434093
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32913092|gb|CF017904.1|CF017904
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|5005803|gb|AI711865.1|AI711865
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|14244972|gb|BG842910.2|BG842910
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|31250336|gb|CD219360.1|CD219360
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|9733322|gb|BE512074.1|BE512074
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
EST: gi|32907867|gb|CF012680.1|CF012680
EST:     ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAAT                         ACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC
genomic: ATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 598

AGAGAAGGGCATTGGAGATGGGACAGTGAGCTATGGAATGGATGACGCAGATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1225

AGAGAAGGGCATTGGAGATGGGACAGTGAGCTATGGAATGGATGACGCAGATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1131

AGAGAAGGGCATTGGAGATGGGACAGTGAGCTATGGAATGGATGACGCAGATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 716

AGAGAAGGGCATTGGAGATGGGACAGTGAGCTATGGAATGGATGACGCAGATGACATCTACATGCGATCATGGACTGGCACTATTATTGGCCCTCATAATgtgagattat ... ttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cttttgcttatttcagtttatgtcgagttgtattaatctcttttcttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA
                                          ttcttac  putative branch site (score: 716)
                                    tctcttttcttactt  CT-rich tract
       ttatttcagtttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gacacttgaaatctttgactgatgaagctgtactttcctacatttcttttgcttatttcagtttatgtcgagttgtattaatctcttttcttacttgaagACCGTCCATGAGGGTCGCATCTACCAGCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - -gaagctg