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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagttgtatgccaaacttgaattcttactgcaggataataggcttgccacttcttgggtgaagtgatttttgactgtcgcatgcctctgacctacctgcacaacagGTAACCTCTCCGGTGCAATGGGAAACCACTGTTAAGACTCTTATGGGCAAGGGGCTTGAGAAAACTTAATGAACTCGGACCAGGAAAG

Basic information

species Zea mays
transcript GRMZM2G053639_T01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcttgggtgaagtgatttttgactgtcgcatgcctctgacctacctgcacaacagGTAACCTCTCCGGTGCAATGGGAAACCACTGTTAAGACTCTTATGGGCAAGGGGCTTGAGAAAACTTAATGAACTCGGACCAGGAAAG
                                 ctctgac  putative branch site (score: 3)
                                       cctacct  CT-rich tract
            tgattttt  TA-rich tract