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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...acttgtgtaaatcagttattgtcttacttcaccttcctatttctctaaataaactaccttacaagtgcttttattctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA

Basic information

species Zea mays
transcript GRMZM2G047223_T03
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G047223_T03 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os08g31840.2 (Oryza sativa), 3'ss of exon 2
acttgtgtaaatcagtta-ttgtcttacttcaccttcctatttctctaa-ataaactaccttacaagtgcttttattctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
|||| |||||  ||  || ||  |||   | |  |   || |    ||   |  | ||| | || |   | |     ||      |||||  ||  | ||||||| | ||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||  ||
acttttgtaatgcatctagtttacttttgtaaagtgggtactggcttactgtgcattacttcactaa--cctcacagctgacatatttttgggtaaccatagGGACGGAAGGAGGATAAAAAAATGGAGGAAGATGATAGGTGTTGGTGGTAGTGACTGGAAACATTATGTTAGAAGAAACCCTCATGTGGTTAAAAGAAGA

upper sequence: GRMZM2G047223_T03 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA19G05360.1 (Glycine max), 3'ss of exon 2
---------acttgtgtaaatcagttattgtcttacttcaccttcc-tatttctctaaataaactaccttacaagtgctttta-------ttctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
           ||      ||   ||  ||| || ||     ||    ||   |    |||||  |  |  | | || |||||       ||| ||||   | | || | | ||||||||||| |||||| | |||||||||||||||||||| || |||||||| | |||||||||||||||| | || || || |||||||| || |||      
gtatttttgttttacacctattgatttgtgtttttctgtgttttaagcatgagtgagtataaaaaatgtggccattggttttacctgtatttccatttacctctcat-tagATATAGGGAGGAGAGAAGGGTTAGAAAATGGAGGAAGATGATTGGGGTTGGTGGCAGTGACTGGAAGCATTATCTAAGGAGAAAACCTCATGTTGTGAAA------

upper sequence: GRMZM2G047223_T03 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA13G07090.1 (Glycine max), 3'ss of exon 1
--acttgtgtaaatcagttattgtcttacttcaccttcctatttc--tctaaataaact------accttacaagtgcttttatt-------ctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
  | || |||   |||  | |||  ||   |     |    |||     | ||| |         |  |  | |||| |||||         | ||||   | | ||   | ||||||||||| |||||| | |||||||||||||||||||| || |||||||| | |||||||||||||||| | || || || |||||||| ||||||      
gtatttttgtttttcacctgttgatttgtgtttttctgtgttttaagcatgaatgagtatataaaatatggccagtgattttacctgtattaccatttacctctcat-cagATATAGGGAGGAGAGAAGGGTTAGAAAATGGAGGAAGATGATTGGGGTTGGTGGCAGTGACTGGAAGCATTATTTAAGGAGAAAACCTCATGTTGTTAAA------

upper sequence: GRMZM2G047223_T03 (Zea mays), 3'ss of exon 2
lower sequence: AT5G15930.1 (Arabidopsis thaliana), 3'ss of exon 2
----acttgtgtaaatcagttattgtcttacttcaccttcctatttctctaaataaactaccttacaagtgcttttattctatt-tcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
         ||| ||  ||| ||||| ||      | ||  | ||  |    |||   ||   | |      | |||||  |   |   |  ||  || || ||||||||| |  ||  | | |||||||||||||||||| ||   ||| |||| ||| ||||||||||| ||||| || || |||||||| || || ||||| 
gtatgtcaatgtgaaaaagtgattgttttgtc---ctttgttgttgttgaggatagtatattgtgct----ttgttatttaaccatggatgctaaattcctttagGGAGGAGAAGAGAGTGACAAAATGGAGGAAGATGATTGGAACTGGGGGTAGTGATTGGAAGCATTACGTTAGGAGAAAACCTCATGTTGTCAAGAGGCGG

upper sequence: GRMZM2G047223_T03 (Zea mays), 3'ss of exon 2
lower sequence: AT3G02460.1 (Arabidopsis thaliana), 3'ss of exon 2
acttgtgtaaatcagttattgtcttacttcaccttcctatttctctaaataaactaccttacaagtgcttttattctatttcttttttatgttg-ctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
                    || |  | | |     | | |  | | || | | ||   |  |     |   | | | ||| | || |  | |  |||||| ||||| |||| | | |||||||||||||||||||| || ||||| || | ||| ||||||||||||||||| || || ||| |||| || | |||||| 
--------------------gtatgtcctgagggagcgaataattttaaaagaatatgattgagagagtgagagtgtgtttttgttgttggctatctatagAGAGGAGAGAAAGGTGAGAAAATGGAGGAAGATGATTGGGGTTGGAGGGAGTGATTGGAAGCATTATGTTAGGAGAAAACCTAATGTTGTCAGAAGGCGT

upper sequence: GRMZM2G047223_T03 (Zea mays), 3'ss of exon 2
lower sequence: Vv14s0083g00540.t01 (Vitis vinifera), 3'ss of exon 2
acttgtgtaaatcag----ttattgtcttacttcaccttcctatttctctaaataaactaccttacaagtgcttttattctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
  || || |||   |    || ||| ||   ||    |   | |||||||   || |   | ||||  |   ||||| |  |   | |     |  |  |  |||||||||||| || | |||||||||||||| ||||| ||  |||| || | ||| ||||||||||| ||||| ||||| ||| ||||||||||||| || 
--ttttgcaaaatggagtttttttggctgtgtttgtgtatgtttttctcttgctataa-gcattaccggatattttactacaagacataag-gtcctttttcagGGAGGAAAGACGGGTTAGAAAATGGAGGAAAATGATTGGAATTGGAGGGAGTGATTGGAAGCATTACGTTAGGAGGAAACCTAATGTGGTTAAAAGACGT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211316770|gb|FL360982.1|FL360982
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|78113905|gb|DV532294.1|DV532294
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211004390|gb|FL335892.1|FL335892
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211322760|gb|FL352838.1|FL352838
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211312819|gb|FL367452.1|FL367452
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGT-TTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211514704|gb|FL326224.1|FL326224
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211078309|gb|FL342738.1|FL342738
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211402149|gb|FL346428.1|FL346428
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211274707|gb|FL354611.1|FL354611
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211199995|gb|FL308017.1|FL308017
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211463075|gb|FL352967.1|FL352967
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211107631|gb|FL307913.1|FL307913
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|91877110|gb|EB407067.1|EB407067
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|89758012|gb|DY687355.1|DY687355
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211419360|gb|FL322265.1|FL322265
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGATGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|89756849|gb|DY686713.1|DY686713
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|91874336|gb|EB404293.1|EB404293
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211241359|gb|FL313117.1|FL313117
EST:     ATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATTGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: ATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACA-TGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211342758|gb|FL350527.1|FL350527
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|78117555|gb|DV535942.1|DV535942
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|71771758|gb|DR969695.1|DR969695
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|78118515|gb|DV536899.1|DV536899
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
EST: gi|211258118|gb|FL346785.1|FL346785
EST:     AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAG                         GGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA
genomic: AATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 47 (upstream exon), 45 (downstream exon)
Score: 64

CTCCATCTCGTGCCGTCGACAGATTTGGTTTTATAAAGCCAGAACAAGGCAATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 30

CTCCATCTCGTGCCGTCGACAGATTTGGTTTTATAAAGCCAGAACAAGGCAATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 75

CTCCATCTCGTGCCGTCGACAGATTTGGTTTTATAAAGCCAGAACAAGGCAATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 53

CTCCATCTCGTGCCGTCGACAGATTTGGTTTTATAAAGCCAGAACAAGGCAATTCACCTGATGGAATTCCAAAAGGCAAGTCTATACATGAGCGTGAAAGgtatgacctg ... gttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taaataaactaccttacaagtgcttttattctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA
          accttac  putative branch site (score: 53)
                                 tttcttttttatgtt  putative PPT
                       ttttattctatttctt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
acttgtgtaaatcagttattgtcttacttcaccttcctatttctctaaataaactaccttacaagtgcttttattctatttcttttttatgttgctatagGGAGGAAAGAAGGATAAGAAAATGGAGGAAGATGATAGGTGTTGGTGGTAATGACTGGAAGCATTATGTTAGAAGGAACCCTCATGTGGTTAAAAGGCGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA