1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...aactttagtaagggaaccaaacacccttcaatttacttgttgtgctttatacagttgatagtttattagctactcagtccttatgccgaacccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCATGTCCTTAGTACATCGAAAACA
species | Zea mays |
transcript | GRMZM2G044237_T02 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|71298836|gb|DR785405.1|DR785405
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|74242073|gb|DT649987.1|DT649987
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|149095151|gb|EE180766.2|EE180766
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|148956344|gb|EC902151.2|EC902151
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|148938791|gb|EC883128.2|EC883128
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|78092275|gb|DV520649.1|DV520649
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|149000193|gb|EE037335.2|EE037335
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|149009106|gb|EE041258.2|EE041258
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCCACGTCCACGCCACTGTACCAC GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|148932140|gb|EC875563.2|EC875563
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|211453339|gb|FL002421.1|FL002421
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|28873422|gb|CB329414.1|CB329414
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|149071265|gb|EE159660.2|EE159660
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|71446471|gb|DR827521.1|DR827521
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|148930889|gb|EC873334.2|EC873334
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|148972816|gb|EE023801.2|EE023801
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|149110343|gb|EE190365.2|EE190365
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|20301290|gb|BQ164233.1|BQ164233
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCEST: gi|149084216|gb|EE173633.2|EE173633
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
EST: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCCACGCCACTGTAGCAG GAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
genomic: GAAGCCTGACTTGGCACTGGTCGCCTGCGACGTCGACGCCACTGTAGCAGgtactccctc ... cccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGC
tttatacagttgatagtttattagctactcagtccttatgccgaacccatttcagGAGCATTTACAACAAACGTCGTAGCCGCCGCACCTGTTTTGTATTGCAAGCATGTCCTTAGTACATCGAAAACA
agttgat putative branch site (score: 114)
cccatttc putative PPT
ttgatagtttatta TA-rich tract