1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...ctgatatgttgtcatgtataattatgctgaatatctggcactaagaatctttgtgtataacccactcacagttcttttttttccttccccaataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTGTTTGGTGCAGTTGGCACCTTGATCTCTTTTACTGTAATATCCCTTG
species | Zea mays |
transcript | GRMZM2G037342_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|211187214|gb|FL054036.1|FL054036
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|148996402|gb|EE035697.2|EE035697
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|78119306|gb|DV537690.1|DV537690
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGNNNNNNNNNCAGTTCTTTCAAAACTTCATTACTATTACACTEST: gi|71315380|gb|DR794294.1|DR794294
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|76921052|gb|DV168433.1|DV168433
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|20300970|gb|BQ163913.1|BQ163913
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|71426858|gb|DR807908.1|DR807908
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|71438439|gb|DR819489.1|DR819489
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GGTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTAEST: gi|18964389|gb|BM660977.1|BM660977
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTA
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|50328971|gb|CO524097.1|CO524097
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|149058822|gb|EE156843.2|EE156843
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|76912611|gb|DV164818.1|DV164818
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|149015463|gb|EE045330.2|EE045330
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|148931601|gb|EC874712.2|EC874712
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTEST: gi|71438478|gb|DR819528.1|DR819528
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACT
EST: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGG GTTCCAAGTGAAGAAGAAACAGT
genomic: GAGGACCTCTTCTTTATTTACCTGCTGCCGCCGATCATATTCAATGCAGGgtacggaatt ... aataagccagGTTCCAAGTGAAGAAGAAACAGT
aatctttgtgtataacccactcacagttcttttttttccttccccaataagccagGTTCCAAGTGAAGAAGAAACAGTTCTTTCGAAACTTCATTACTATTACACTGTTTGGTGCAGTTGGCACCTTGATCTCTTTTACTGTAATATCCCTTG
cactcac putative branch site (score: 217)
ctcacagttctttttt CT-rich tract
ttctttttttt TA-rich tract