1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgctctatttgtttgcttttttatcttggtagtattccttacttcaaataatgtgtgtttgactgacatgatggtaaaaaacaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATGGATGTGACTACTCACTAAAG
species | Zea mays |
transcript | GRMZM2G035595_T04 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGA-TTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211142481|gb|FL118078.1|FL118078
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|71441274|gb|DR822324.1|DR822324
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|148949122|gb|EC894553.2|EC894553
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211025730|gb|FL435838.1|FL435838
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211541587|gb|FL476015.1|FL476015
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|71759438|gb|DR957375.1|DR957375
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211246948|gb|FL479530.1|FL479530
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|86472181|gb|DY238551.1|DY238551
genomic: GGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: CGCATTGCATGGAGTTCATCAT-TCCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|149009585|gb|EE154018.2|EE154018
genomic: CGCATTGCATGGAGTTCATCATAT-CCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|5928615|gb|AW056012.1|AW056012
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGA-TTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|5816276|gb|AI987192.1|AI987192
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGA-TTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|84970100|gb|DV171467.2|DV171467
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|4776320|gb|AI665323.1|AI665323
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
tccttacttcaaataatgtgtgtttgactgacatgatggtaaaaaacaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATGGATGTGACTACTCACTAAAG
gactgac putative branch site (score: 2)
taaaaaacaaataca TA-rich tract