Sequence
atgc intronic sequence ATGC exonic sequence...attgaatatttttctccctcatgcttaaataacaaggtttatactaaattattactaatctaatgtttacatgaccgttctgcttttgtgaaaatggcagGTATATACTAATGGCAGAACCAGACCATATATTTGTGAAACCTCTACCAAATTTGGCCCATGACGATGACCCAGCAGCATTTCCCTTCTTTTACATTACA
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G035595_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os01g16600.1 (Oryza sativa), 3'ss of exon 2
attgaatatttttctccctcatgcttaaataacaaggtttatactaaattattactaat---ctaatgtttacatgaccgttctgcttttgtgaaa-atggcagGTATATACTAATGGCAGAACCAGACCATATATTTGTGAAACCTCTACCAAATTTGGCCCATGACGATGACCCAGCAGCATTTCCCTTCTTTTACATTACA---
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-tgagatgaagaacattgttg-gcgttggtaattta-tttgtgctaaaataatgtggatgttctgatgtgttttcaatt-ttctgttttgttgaaacatggcagATACATATTGATGGCAGAACCAGATCATATATTTGTGAGACCTTTACCAAATTTAGCCCG---CGATGATCCAGCAGCATTCCCTTTCTTTTACATTACACCAMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|32795199|gb|CD947435.1|CD947435EST: AGGCCGTGGGCATTTGTGCAGTGGCTTCAGAAAGCAAAGATTGAAGAAGA GTATATACTAATGGCAGAACCAGACCATATATTTGTGAAACCTCTACCAAA
genomic: AGGCCGTGGGCATTTGTGCAGTGGCTTCAGAAAGCAAAGATTGAAGAAGAgtaagttccg ... aaaatggcagGTATATACTAATGGCAGAACCAGACCATATATTTGTGAAACCTCTACCAAA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.aaattattactaatctaatgtttacatgaccgttctgcttttgtgaaaatggcagGTATATACTAATGGCAGAACCAGACCATATATTTGTGAAACCTCTACCAAATTTGGCCCATGACGATGACCCAGCAGCATTTCCCTTCTTTTACATTACA
attactaatctaat TA-rich tract