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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atacgttcaagcttgagtgggtttcttatgcctttgaaagtttacctggaacacttattaaactgatgaccccccaccacaaaatgactctttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA

Basic information

species Zea mays
transcript GRMZM2G033894_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G033894_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os04g02900.1 (Oryza sativa), 3'ss of exon 2
-----atacgttcaagcttgagtgggtttcttatgcc--tttgaaagtttacctggaacacttattaaactgatgaccccccaccacaaaatgactctttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA
      ||   |||  |     | |  | |||| | |   |  | |||||   |      | |  |||  || |    |   | |     |||||  | | || ||||||||||| | || ||||||||||||||  | || || |||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||
ggtttgtatcatcacacagttattgaatccttaagtcagctgtacagtttcttt------cctcctaatttgctctgactaaatcgtcttatgacattgt-gcacagATGAGAAATCTCATTACGCCGCAAGGGACCCCATTACAGCCTTGAAGAAGTACATCATCGAACAGAACCTTGCAACTGAATCCGAGCTGAAGAGCATCGA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|149073651|gb|EE161956.2|EE161956
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTTTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|4775863|gb|AI664868.1|AI664868
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|32846893|gb|CD986574.1|CD986574
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|60397341|gb|DN230157.1|DN230157
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|149001025|gb|EE038273.2|EE038273
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|31353749|gb|CD438106.1|CD438106
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|88758374|gb|DY542743.1|DY542743
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|67033415|gb|CO462164.1|CO462164
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|161586901|gb|EY954813.1|EY954813
EST:     CGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAG
genomic: CGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATG-AGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAG
EST: gi|194717163|gb|FK934316.1|FK934316
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|32850478|gb|CD990159.1|CD990159
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|89251703|gb|DY623489.1|DY623489
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|149005072|gb|EE039600.2|EE039600
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|148930579|gb|EE285231.2|EE285231
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|148969137|gb|EE019875.2|EE019875
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|108953386|gb|EC364715.1|EC364715
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|6021300|gb|AW066228.1|AW066228
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGGCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|4967157|gb|AI692075.1|AI692075
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACCCTACGCCGCAAGGGATTCTATCCCGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|18384118|gb|BM417318.1|BM417318
EST:     ACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: ACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|19057883|gb|BM736550.1|BM736550
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         G
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcag-
EST: gi|19057883|gb|BM736550.1|BM736550
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         G
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcag-
EST: gi|22489092|gb|BU049015.1|BU049015
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGAAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|211049937|gb|FL115772.1|FL115772
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|71769825|gb|DR967762.1|DR967762
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|74236102|gb|DT644016.1|DT644016
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTTTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|149012209|gb|EE042506.2|EE042506
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTTTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|6022009|gb|AW066937.1|AW066937
EST:     GACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: GACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|91048341|gb|EB158759.1|EB158759
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|5005964|gb|AI712026.1|AI712026
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAGGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|31355932|gb|CD440289.1|CD440289
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|12970895|gb|BG267212.1|BG267212
EST:     TCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: TCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|76924384|gb|DV169927.1|DV169927
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|4886205|gb|AI677325.1|AI677325
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
EST: gi|19058193|gb|BM736860.1|BM736860
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGC
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGC
EST: gi|60343524|gb|DN210497.1|DN210497
EST:     CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTG                         ATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT
genomic: CAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 97

GAGAGGGCAAGGAGAGGTGAAGGGCCAACCCTAGTCGAGTGTGAAACATACAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 87

GAGAGGGCAAGGAGAGGTGAAGGGCCAACCCTAGTCGAGTGTGAAACATACAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 62

GAGAGGGCAAGGAGAGGTGAAGGGCCAACCCTAGTCGAGTGTGAAACATACAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 403

GAGAGGGCAAGGAGAGGTGAAGGGCCAACCCTAGTCGAGTGTGAAACATACAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGgtaaggatta ... tttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctggaacacttattaaactgatgaccccccaccacaaaatgactctttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA
               aactgat  putative branch site (score: 403)
                                          ctctttcgc  putative PPT
       acttattaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
atacgttcaagcttgagtgggtttcttatgcctttgaaagtttacctggaacacttattaaactgatgaccccccaccacaaaatgactctttcgcgcagATGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - cttatgc
- - - - - - - - - - - - - - - - - - - - - -acctgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgatga