Sequence
atgc intronic sequence ATGC exonic sequencegtatgtcggtcgataatttcatttgcatttgttcattctgtggtttcagagctgctatgaatccaatgtgctcaagtgtggattgtgaatgcagTACCTGAGACACCAAGGAGGAGCTACCGGAAGCTCTTGTCGACCATGATAGGGGATAAACTCTGGGATGAGAATGGAAAAGACAGAAGGTGTGTGTCTCG
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G032337_T01 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os11g08950.1 (Oryza sativa), 3'ss of exon 4
gtatgtcggtcg-ataatttcatttgca-tttgttc--attctgtggtttcagagctgctatgaatcca--atgtgctcaagtgtggattgtg-aatgcagTACCTGAGACACCAAGGAGGAGCTACCGGAAGCTCTTGTCGACCATGATAGGGGATAAACTCTGGGATGAGAATGGAAAAGACAGAAGGTGTGTGTCTCG
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gtatgctactcacacaatttcattttcagtttattctcatttcttggcat--gggcggctgtaaattcagcatatgctgaagtctgtaaaatggaatgcagTGACAGAGACACCAAGGAGGAGTTACCGGAAGCTCCTGACTTCTGTGATTGGGGAGAAACTTCGGGATGAGTGTGAACAAGATAACAGGTCCATTTTCCGMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|28931384|gb|CB334745.1|CB334745EST: AGATGCTGGTCACGGGTTGCAACATGAACTGTACCAAAGCAATACCACGA TACCTGAGACACCAAGGAGGAGCTACCGGAAGCTCTTGTCGACCATGATAG
genomic: AGATGCTGGTCACGGGTTGCAACATGAACTGTACCAAAGCAATACCACGAgtatgtcggt ... gtgaatgcagTACCTGAGACACCAAGGAGGAGCTACCGGAAGCTCTTGTCGACCATGATAG
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gtggtttcagagctgctatgaatccaatgtgctcaagtgtggattgtgaatgcagTACCTGAGACACCAAGGAGGAGCTACCGGAAGCTCTTGTCGACCATGATAGGGGATAAACTCTGGGATGAGAATGGAAAAGACAGAAGGTGTGTGTCTCG
tatgaat TA-rich tract