1 5' 3' | 2 5' 3' | 3 5' 3' |
gtcgccttctttttatcattcactcgttttattaacattcgatatcatcaaatcttctcatcatgcttcaacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATGCGGGTTGCCAATCAGTACCTATTTCAGTGCTCTGAAATTATTATGGTTG
species | Zea mays |
transcript | GRMZM2G023163_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATGEST: gi|88753132|gb|DY537273.1|DY537273
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACEST: gi|20300207|gb|BQ163150.1|BQ163150
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCAC
EST: CTGTATAATGCCATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGAACCCACTTCGTGGAGACATGEST: gi|94475699|gb|EB704657.1|EB704657
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATGEST: gi|28187593|gb|CB179203.1|CB179203
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAEST: gi|101392646|gb|EB818253.1|EB818253
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGA
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATGEST: gi|22490347|gb|BU050270.1|BU050270
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
EST: CTGTATAATGCCATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGAACCCACTTCGTGGAGACATGEST: gi|211457288|gb|FK983850.1|FK983850
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGAYTGGAAAATGAGCTGTCAGGCGGTAGGACC-ACTTCGTGGAGAEST: gi|19057965|gb|BM736632.1|BM736632
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGA
EST: CTGTATAATGCCATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGAACCCACTTCGTGGAGACATGEST: gi|211457293|gb|FK983855.1|FK983855
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
EST: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAG GAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
genomic: CTGTATAATGCTATTGTGTGGATGGATGCTCGCACAAGCCCTGTTTGCAGgtcgccttct ... aacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATG
cgttttattaacattcgatatcatcaaatcttctcatcatgcttcaacaacacagGAGATTGGAAAATGAGCTGTCAGGCGGTAGGACCCACTTCGTGGAGACATGCGGGTTGCCAATCAGTACCTATTTCAGTGCTCTGAAATTATTATGGTTG
tattaac putative branch site (score: 179)
tattaacatt TA-rich tract