Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atgtgtctgctcagtgaatggaaatttaaatttactgccacacttcatttttcatgtatattttcatgaaattaagagggtcaacattttacttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG

Basic information

species Zea mays
transcript GRMZM2G012052_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G012052_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os05g38550.2 (Oryza sativa), 3'ss of exon 2
atgtgtctgctcagtgaatggaaatttaaatttactgccacacttc---atttttcatgtatattttcatgaaattaagagggtcaacattttacttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG
 |   |    | |  |  |     |||   ||||   | | |  |    || |||||  |  |  ||  | | ||| |  | || ||| || |  || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || || ||||||||||| ||||| ||||||||||||||||| ||||
-ttcttactttaaaagcttaatttttttgctttaaaccaatatctttatatatttcac-tggaccttggtaagatttaatgtgtgaac-ttctgtttctgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAATTATCCGAATAGTCCCCCATCAGTAAGGTTTACCTCTGAGATGTGGCATCCAAATG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8368602|gb|BE051547.1|BE051547
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|78106424|gb|DV524842.1|DV524842
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202276|gb|FL182841.1|FL182841
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60397439|gb|DN230255.1|DN230255
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199703|gb|FL182816.1|FL182816
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|8367792|gb|BE050737.1|BE050737
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32866578|gb|CF006260.1|CF006260
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202269|gb|FL182834.1|FL182834
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|78106425|gb|DV524843.1|DV524843
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211204840|gb|FL182847.1|FL182847
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGASACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60349853|gb|DN216826.1|DN216826
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|15590017|gb|BI674633.1|BI674633
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32859566|gb|CD999247.1|CD999247
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32912414|gb|CF017226.1|CF017226
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32937161|gb|CF041980.1|CF041980
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32915741|gb|CF020553.1|CF020553
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199713|gb|FL182826.1|FL182826
EST:     AACATCTTCGAGTGGCAGGTTACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32915780|gb|CF020592.1|CF020592
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202277|gb|FL182842.1|FL182842
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32937054|gb|CF041873.1|CF041873
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGGGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202270|gb|FL182835.1|FL182835
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202278|gb|FL182843.1|FL182843
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGGAG-CTACTTCAATGCAATAATGACCTTCCCCCAGAACCATCCCA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGG-AGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCA
EST: gi|87157616|gb|DY402405.1|DY402405
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|4646408|gb|AI491587.2|AI491587
EST:     ACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: ACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199712|gb|FL182825.1|FL182825
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211204842|gb|FL182849.1|FL182849
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|113702787|gb|EE680291.1|EE680291
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063555|gb|FL182811.1|FL182811
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|116813435|gb|EC855886.1|EC855886
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|67043112|gb|CO469367.1|CO469367
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|8368603|gb|BE051548.1|BE051548
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|6102130|gb|AW126600.1|AW126600
EST:     ACCATCATCGGACCGCCTGACACCCTATA                         TGATGNAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: ACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202267|gb|FL182832.1|FL182832
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCARAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202275|gb|FL182840.1|FL182840
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202273|gb|FL182838.1|FL182838
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32865547|gb|CF005229.1|CF005229
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199707|gb|FL182820.1|FL182820
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199714|gb|FL182827.1|FL182827
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32854785|gb|CD994466.1|CD994466
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|16927032|gb|BM080101.1|BM080101
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGNAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|8367211|gb|BE050156.1|BE050156
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|37397234|gb|CF635912.1|CF635912
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199704|gb|FL182817.1|FL182817
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202268|gb|FL182833.1|FL182833
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|21843234|gb|BQ703815.1|BQ703815
EST:     AACATCTTCGAGCGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32910355|gb|CF015167.1|CF015167
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|78081300|gb|DV509712.1|DV509712
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063556|gb|FL182812.1|FL182812
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|16926454|gb|BM079522.1|BM079522
EST:     GCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: GCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|22818858|gb|BU498948.1|BU498948
EST:     ACATCTTCGAGTGGCAGGTCACCATCAATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: ACATCTTCGAGTGGCAGGTCACCATC-ATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|78081299|gb|DV509711.1|DV509711
EST:     GGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: GGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202279|gb|FL182844.1|FL182844
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|26559697|gb|CA831932.1|CA831932
EST:     GGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: GGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|78022177|gb|DV490564.1|DV490564
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60345359|gb|DN212332.1|DN212332
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|28568878|gb|CB280753.1|CB280753
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063552|gb|FL182808.1|FL182808
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202280|gb|FL182845.1|FL182845
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063553|gb|FL182809.1|FL182809
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32854784|gb|CD994465.1|CD994465
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199711|gb|FL182824.1|FL182824
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32855663|gb|CD995344.1|CD995344
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60397474|gb|DN230290.1|DN230290
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|5325242|gb|AI783433.1|AI783433
EST:     GACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: GACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199717|gb|FL182830.1|FL182830
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211204839|gb|FL182846.1|FL182846
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTCCCCCC
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCC
EST: gi|211063548|gb|FL182804.1|FL182804
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|26557802|gb|CA830037.1|CA830037
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32936878|gb|CF041697.1|CF041697
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60396215|gb|DN229084.1|DN229084
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|161589288|gb|EY963335.1|EY963335
EST:     ACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACCACCCTATA                         TGATGGAGGCTACTTCAATG
genomic: ACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGAC-ACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATG
EST: gi|211063558|gb|FL182814.1|FL182814
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|71764281|gb|DR962218.1|DR962218
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60395236|gb|DN228105.1|DN228105
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063550|gb|FL182806.1|FL182806
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|5860471|gb|AW011693.1|AW011693
EST:     GACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: GACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199706|gb|FL182819.1|FL182819
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCC
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCC
EST: gi|211063559|gb|FL182815.1|FL182815
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|31360886|gb|CD445243.1|CD445243
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|4646409|gb|AI621736.1|AI621736
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199705|gb|FL182818.1|FL182818
EST:     AACATCTTCGAGTGGCAGGTTACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063549|gb|FL182805.1|FL182805
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60340966|gb|DN207939.1|DN207939
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|76289728|gb|DV029296.1|DV029296
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32868626|gb|CF008308.1|CF008308
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32936126|gb|CF040938.1|CF040938
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32936903|gb|CF041722.1|CF041722
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202274|gb|FL182839.1|FL182839
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211204841|gb|FL182848.1|FL182848
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063547|gb|FL182803.1|FL182803
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60399525|gb|DN232336.1|DN232336
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|32915813|gb|CF020625.1|CF020625
EST:     AACATCTTCGTGGGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211063557|gb|FL182813.1|FL182813
EST:     ACATCTTCGAGTGGCAGGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAA
genomic: ACATCTTCGAGTGGCAGG-TCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAA
EST: gi|32858203|gb|CD997884.1|CD997884
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|60336778|gb|DN203751.1|DN203751
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCCGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199708|gb|FL182821.1|FL182821
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211202271|gb|FL182836.1|FL182836
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGNAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|211199716|gb|FL182829.1|FL182829
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|15589463|gb|BI674079.1|BI674079
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
EST: gi|9732280|gb|BE511032.1|BE511032
EST:     AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATA                         TGATGGATGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA
genomic: AACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 935

TTGCGAAGAACCCCGTGGATGGGTTCTCCGCCGGGCTTGTAGACGACAGCAACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1692

TTGCGAAGAACCCCGTGGATGGGTTCTCCGCCGGGCTTGTAGACGACAGCAACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1645

TTGCGAAGAACCCCGTGGATGGGTTCTCCGCCGGGCTTGTAGACGACAGCAACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1549

TTGCGAAGAACCCCGTGGATGGGTTCTCCGCCGGGCTTGTAGACGACAGCAACATCTTCGAGTGGCAGGTCACCATCATCGGACCGCCTGACACCCTATAgtgagttcga ... acttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

catttttcatgtatattttcatgaaattaagagggtcaacattttacttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG
                                         ttttactttt  CT-rich tract
        atgtatattttcatga  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
atgtgtctgctcagtgaatggaaatttaaatttactgccacacttcatttttcatgtatattttcatgaaattaagagggtcaacattttacttttgcagTGATGGAGGCTACTTCAATGCAATAATGACCTTCCCCCAGAACTATCCCAACAGCCCGCCATCAGTAAGATTTACTTCTGAGATGTGGCATCCGAATG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATG
- -tgtctgc
- - - - - - -gtgaatg
- - - - - - - - - - - - - - - - tactgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catgaaa