Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gcgcgcgtatcctacactacactttaattccggcctccactccagcccacggcaacggcactaactaatctgaggatctatctccccgccgctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC

Basic information

species Zea mays
transcript GRMZM2G004699_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G004699_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os11g33270.1 (Oryza sativa), 3'ss of exon 2
gcgcgcgtatcctacact-acactttaattccggcctccactccagcccacggcaacggcactaactaatctgaggatctatctccccgccgctccgc-cagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC---
    ||   |  ||  || | ||        |       | ||| |   ||  ||   | ||   || |  |  | || ||||   |   |  |     |||||||||||||||||||  ||||||| |||||||||||||||   ||   ||||||||||||||||||||||||| |||||||||||||||||||||||||   
--aagcaacttgtaatctgaaacggagggagcacatgaaaatcctgtaaacttcatacgtacgttctgaaatctgaatgtatcgatctatcaatatatgcagGTTCTTCGTGGACGACACGCCGATCAGGGTGTTCAAGAACA---GCAAGGACCTGGGCGTGCGGTACCCGTTCAACCAGCCGATGAAGCTCTACTCCAGCCTG

upper sequence: GRMZM2G004699_T01 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA16G04950.2 (Glycine max), 3'ss of exon 3
gcgcgcgtatcctacactacactttaattccggcctccactccagcccacggcaacggcactaactaatctgaggatctatctcc----ccgccgctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC---
     |  |  ||| |  | |   || ||   |  |  |    |    |    |       | |    | | ||||   |  |        |  | |  || |||||||| |||||||| ||||| ||| ||||||||||||||   |||   ||| |||| |||   | ||| |||  |||||| |||||| |||||  |||    
--ttactaaaactagaaga-ataatatttattggttaaaaggaaataaaaaaaagaacttgtgagatgtttaaggagaaagatttgatgttggggatgtgc-agGTTCTTTGTGGACGAGGTGCCAATCAGGGTGTTCAAGAAC---AGCAAGGACTTGGGAGTGAAATTCCCATTCGACCAGCCAATGAAGATCTACAACAGTTTG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71312159|gb|DR792607.1|DR792607
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78092103|gb|DV520477.1|DV520477
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|33467747|gb|CF244796.1|CF244796
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGG
EST: gi|9255437|gb|BE345905.1|BE345905
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGG
EST: gi|149083468|gb|EE172795.2|EE172795
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|22819448|gb|BU499538.1|BU499538
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78084131|gb|DV512524.1|DV512524
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|93284195|gb|EB676459.1|EB676459
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78117390|gb|DV535777.1|DV535777
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211296838|gb|FL169177.1|FL169177
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|74238743|gb|DT646657.1|DT646657
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|89761345|gb|DY689393.1|DY689393
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71330501|gb|DR802018.1|DR802018
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|93012237|gb|EB637757.1|EB637757
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71774104|gb|DR971986.1|DR971986
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|29130857|gb|CB381561.1|CB381561
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGC
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGC
EST: gi|26456139|gb|CA827722.1|CA827722
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|76018116|gb|DT945286.1|DT945286
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|76916744|gb|DV166531.1|DV166531
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149108719|gb|EE292927.2|EE292927
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71312169|gb|DR792608.1|DR792608
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149102065|gb|EE287531.2|EE287531
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|50330462|gb|CO525588.1|CO525588
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71768545|gb|DR966482.1|DR966482
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|23357642|gb|BU645291.1|BU645291
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGT
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGT
EST: gi|71757786|gb|DR955723.1|DR955723
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78123638|gb|DV542022.1|DV542022
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78117391|gb|DV535778.1|DV535778
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149072783|gb|EE161027.2|EE161027
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211296837|gb|FL169176.1|FL169176
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGGTGT-CAAGAACACGAGCGCCG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGG-TGTTCAAGAACACGAGCGCCG
EST: gi|50326237|gb|CO521363.1|CO521363
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGT
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGT
EST: gi|148986547|gb|EE030306.2|EE030306
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|22546396|gb|BU098707.1|BU098707
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78108082|gb|DV526500.1|DV526500
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|91053823|gb|EB164241.1|EB164241
EST:     GGAACCTGTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: GGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|148960072|gb|EE153316.2|EE153316
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTTCA-GAACACGAGCGCCG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTT-CAAGAACACGAGCGCCG
EST: gi|148956114|gb|EC901879.2|EC901879
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71327852|gb|DR800554.1|DR800554
EST:     CGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: CGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71768546|gb|DR966483.1|DR966483
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149087856|gb|EE177138.2|EE177138
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|148935686|gb|EC879730.2|EC879730
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71443011|gb|DR824061.1|DR824061
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|50329318|gb|CO524444.1|CO524444
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211298984|gb|FL169196.1|FL169196
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGC
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGC
EST: gi|71761618|gb|DR959555.1|DR959555
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|91867923|gb|EB399853.1|EB399853
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71419859|gb|DR804912.1|DR804912
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|148951884|gb|EC897657.2|EC897657
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|89757406|gb|DY687022.1|DY687022
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71765374|gb|DR963311.1|DR963311
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|76924629|gb|DV170057.1|DV170057
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71446933|gb|DR827983.1|DR827983
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|67016098|gb|CO444847.1|CO444847
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|74234087|gb|DT642001.1|DT642001
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78108083|gb|DV526501.1|DV526501
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|148951883|gb|EC897656.2|EC897656
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|91870082|gb|EB400692.1|EB400692
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|94473066|gb|EB702024.1|EB702024
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71449513|gb|DR830563.1|DR830563
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71448203|gb|DR829253.1|DR829253
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71332783|gb|DR803386.1|DR803386
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|67026249|gb|CO454998.1|CO454998
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTTTTCAATAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|89248253|gb|DY620039.1|DY620039
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|67018683|gb|CO447432.1|CO447432
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|22546122|gb|BU098443.1|BU098443
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGGGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|67039565|gb|CO465820.1|CO465820
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|101399106|gb|EB821426.1|EB821426
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|78119700|gb|DV538084.1|DV538084
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|67010732|gb|CO439481.1|CO439481
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|74246492|gb|DT654406.1|DT654406
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|101398695|gb|EB821220.1|EB821220
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71332535|gb|DR803236.1|DR803236
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71766320|gb|DR964257.1|DR964257
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211298981|gb|FL169193.1|FL169193
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAAC-TCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGGTGT-CAAGAACACGAGCGCCG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGG-TGTTCAAGAACACGAGCGCCG
EST: gi|76934461|gb|DV173895.1|DV173895
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|74234086|gb|DT642000.1|DT642000
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|86467728|gb|DY234098.1|DY234098
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149077270|gb|EE165944.2|EE165944
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149096995|gb|EE182798.2|EE182798
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|91055787|gb|EB166205.1|EB166205
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|148962796|gb|EE013713.2|EE013713
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211296842|gb|FL169181.1|FL169181
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71332784|gb|DR803387.1|DR803387
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|76015298|gb|DT942468.1|DT942468
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71762509|gb|DR960446.1|DR960446
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211296848|gb|FL169187.1|FL169187
EST:     ACCAAGGAGYACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71419856|gb|DR804911.1|DR804911
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|71327855|gb|DR800555.1|DR800555
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|148972378|gb|EE023300.2|EE023300
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|40303791|gb|CK348178.1|CK348178
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|149085114|gb|EE174620.2|EE174620
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGA
EST: gi|211298980|gb|FL169192.1|FL169192
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGTACCTCTACATGATCGC                         GTTCTTCGTGGACGACGTGCCGGATCCCGGTGGTCAAGAACACGAGCGCCG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCG-ATCCGGGTGTTCAAGAACACGAGCGCCG
EST: gi|211296836|gb|FL169175.1|FL169175
EST:     ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGC                         GTTCTTCGTGGACGACG
genomic: ACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 300

CCGGCGGCAAGGGCGACCGCGAGCAGCGGATCTACCTCTGGTTCGACCCCACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 315

CCGGCGGCAAGGGCGACCGCGAGCAGCGGATCTACCTCTGGTTCGACCCCACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 17

CCGGCGGCAAGGGCGACCGCGAGCAGCGGATCTACCTCTGGTTCGACCCCACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 68

CCGGCGGCAAGGGCGACCGCGAGCAGCGGATCTACCTCTGGTTCGACCCCACCAAGGAGTACCACTCCTACTCCGTCCTCTGGAACCTCTACATGATCGCgtaagcaccc ... gctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cccacggcaacggcactaactaatctgaggatctatctccccgccgctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC
                                   tctccccgccgctcc  CT-rich tract
                taactaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gcgcgcgtatcctacactacactttaattccggcctccactccagcccacggcaacggcactaactaatctgaggatctatctccccgccgctccgccagGTTCTTCGTGGACGACGTGCCGATCCGGGTGTTCAAGAACACGAGCGCCGACCTGGGCGTGCGGTACCCGTTCAGCCAGCCGATGAAGCTCTACTCCAGC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - cactaca
- - - - - - - - - - - - - - - - gcctcca
- - - - - - - - - - - - - - - - - - - -ctccagc
- - - - - - - - - - - - - - - - - - - - - - - ccacggc